TCONS_00051670-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051670-protein
Unique Name	TCONS_00051670-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	505

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051670-protein ID=TCONS_00051670-protein|Name=TCONS_00051670-protein|organism=Clytia hemisphaerica|type=polypeptide|length=505bp
MAFTKFKKFIRSLRYYPELLFVFHLYGVLFSGPTLEQYLYKVFSDEVGYN
YTYNSNTANSDCNKGDLNSTSHTLLKEVQDRISKFQLYLMLAQNIPPILL
VLFFGPLADRYGRKVVMMIAFIGYAFWSTILTAVVYFNLSRYLILVANFI
WGCCGYYLSAVVALLAYVSDRTQPDNRAFRIAIVDLVLFAAITASNFSNG
KYLQEFGFLACFLLMFTISIVSVIWCFLFISESLPPEKRTETKDPLFTIP
RRVLGSVIRKRPNRKKLLLLMVVDSTVGFTAPVSVQSLLILILLNIPFCW
PSSWIGYYRGALFAIMGVGGVIAVKLLPYIMAKPLVIIVACLSSAGYLVS
FSLSRSVWASYVSILAGLFAYSAQPITRGIISQIVDANEQGAVFSVLGFF
QTIVSLVASLSYNAIYIYTNQHNEPAAVFIIASFTTIIPIIFSTYFYYVE
KKNRNTQNDDENTEQPTPPTNKNCNDTKEDDKGGEDYESIDNAFNENDDR
NGLVI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032703	XLOC_032703	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051670	TCONS_00051670	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 255..476 e-value: 3.6E-18 score: 65.1
None	No IPR available	GENE3D	1.20.1250.20		coord: 4..245 e-value: 5.6E-19 score: 67.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..505
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 89..408 e-value: 2.8E-23 score: 82.3
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 25..451 score: 9.867
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 88..447 e-value: 1.60914E-19 score: 87.3693
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 88..460

Blast

[Close]

BLAST of TCONS_00051670-protein vs. Swiss-Prot (Human)
Match: S46A3 (Solute carrier family 46 member 3 OS=Homo sapiens GN=SLC46A3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.621e-32
Identity = 99/399 (24.81%), Postives = 192/399 (48.12%), Query Frame = 0

Query:   26 YGVLFSGPTLEQYLYKVFSDEVGYNYTYNSNTANSDCNKGDLNSTSHTLLKEVQDRISKFQLYLMLAQNIPPILLVLFFGPLADRYGRKVVMMIAFIGYAFWSTILTAVVYFNLSRYLILVANFIWGCCGYYLSAVVALLAYVSDRTQPD-NRAFRIAIVDLVLFAAITASNFSNGKYLQEFGFLACFLLMFTISIVSVIWCFLFISESLPPEKRTETKDPLFTIPRRVLGSVIR-----KRPNRKKLLLLMVVDSTV--GFTAPVSVQSLLILILLNIPFCWPSSWIGYYRGALFAIMGVGGVIAVKLLPYIMAKPLVIIVACLSSAGYLVSFSLSRSVWASYVSILAGLFAYSAQPITRGIISQIVDANEQGAVFSVLGFFQTIVSLVASLSYNAIY 416
            + +  +GP   QY+Y+   +E G NYT++S++  S+C K   +S      +EVQ ++S+F L + ++  IP ++       ++D YGRK  M+++ +G    S  L  + YF     L++ + FI   CG Y +   A  AY+ D+ +    +  RIAI+D +L      +  S+G +++E GF   FL++     V++I+   F+ +   P K   +++   +          R     K  + K+  LL ++  TV   F   + +  + IL  L+ P CW   +IG Y  AL +   +   + + L  Y M    +  +   ++   +   + + +    +++ +  LF      + R ++S++V + EQG +F+ + F +T+  + A  ++N IY
Sbjct:   15 FAMTLTGPLTTQYVYRRIWEETG-NYTFSSDSNISECEKNK-SSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGD---PVKECSSQNVTMSCSEGFKNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIG-YGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIY 407

The following BLAST results are available for this feature:

BLAST of TCONS_00051670-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051670-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S46A3	1.621e-32	24.81	Solute carrier family 46 member 3 OS=Homo sapiens ...	[more]

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TCONS_00051670-protein (polypeptide) - C. hemisphaerica