TCONS_00051673-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051673-protein
Unique Name	TCONS_00051673-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	485

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051673-protein ID=TCONS_00051673-protein|Name=TCONS_00051673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
MLMLLKELWRSLQYRPEFIGCILFFAMMMMQPINEQYYYKVYSKKHGLEY
HFENKKAGCPNDTGTDNNVTRLMHEVQADVSRFVTRQTLVQSLPPMITLL
FYGPMSDRFGRKPFMILPTCGFLLLMLCLVMIELTGISILWYNVAGFIAG
CTGFLAGTVSPILSYLTDIVPKEKLAMRIAVIDLIIFFSIAISNMLSGII
LNSFGFLYTFVFMGACFLASILLMIIHLKESLPKEKRTKQEYHWIKSPKR
IYKLLKVPRSQKWRLKMLLSIDALSFLSGQVVIGPILLLRLLNSPFCWGS
QGIGFFRGTYFFISGVGAVFAVKVFPKIFHKAFVILISNLSSFGYLVLLG
SFETMTWYYIAIIVGIFSFSTPAMTRSMLGNQVKDHERGALYAFVSAMQS
LVQTIATFTYQKIYRLADEKGKPQAVFIAIAFALAFPFILAFIYMTRDIA
YERKERKRKAENSNEERTADQKSLHDAKENDPLIS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032704	XLOC_032704	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051673	TCONS_00051673	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 4..243 e-value: 9.6E-25 score: 86.6 coord: 256..470 e-value: 1.3E-15 score: 56.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 455..485
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 88..406 e-value: 1.1E-25 score: 90.2
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 90..445 e-value: 6.32624E-20 score: 88.5249
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 90..458

Blast

[Close]

BLAST of TCONS_00051673-protein vs. Swiss-Prot (Human)
Match: S46A3 (Solute carrier family 46 member 3 OS=Homo sapiens GN=SLC46A3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.504e-21
Identity = 94/410 (22.93%), Postives = 177/410 (43.17%), Query Frame = 0

Query:   25 FAMMMMQPINEQYYYKVYSKKHGLEYHFENKKAGCPNDTGTDNNVTRLMHEVQADVSRFVTRQTLVQSLPPMITLLFYGPMSDRFGRKPFMILPTCGFL-----LLMLCL------VMIELTGISILWYNVAGFIAGCTGFLAGTVSPILSYLTDIVPKEKL-AMRIAVIDLIIFFSIAISNMLSGIILNSFGFLYTFVFMGACFLASILLMIIHLKESLPKEKRTKQEYHWIKSPK------RIYKLLKVPRSQKWRLKMLLSIDALSFLSGQVVIGPILLLRLLNSPFCWGSQGIGFFR--GTYFFISGVGAVFAVKVFPKIFHKAFVILISNLSSFGYLVLLGSFETMTWYYIAIIVGIFSFSTPAMTRSMLGNQVKDHERGALYAFVSAMQSLVQTIATFTYQKIY 414
            FAM +  P+  QY Y+   ++ G  Y F +       +    + +     EVQ  VSRF  +  +   +P +++      +SD +GRK  MIL + G L     L +LC       ++I  T I     N   F   C            +Y+ D   + K   +RIA+ID ++     ++ + SG  +   GF ++F+ +      +++ ++  L +  P ++ + Q      S        R Y L K    ++  L  LL    +++    + I PI +L  L+SP CW    IG+    G+  F++    ++      +  H AF+ + + ++    + +     T    ++A +  +F+    ++ RSML   V+  E+G L+A ++ +++L    A  T+  IY
Sbjct:   15 FAMTLTGPLTTQYVYRRIWEETG-NYTFSSDSNISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGAC-----------FAYIVDQCKEHKQKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGD--PVKECSSQNVTMSCSEGFKNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTG---MAMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIY 407

The following BLAST results are available for this feature:

BLAST of TCONS_00051673-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051673-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S46A3	3.504e-21	22.93	Solute carrier family 46 member 3 OS=Homo sapiens ...	[more]

You are here

TCONS_00051673-protein (polypeptide) - C. hemisphaerica