TCONS_00051677-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051677-protein
Unique NameTCONS_00051677-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051677-protein ID=TCONS_00051677-protein|Name=TCONS_00051677-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MNTEEDEIQNHTKPKCIYHICVLCPRNKNFQTALELSHHLQTMHYYVTVI
VCCFCNIRLPSMEAVDVHNEMAHTSEPIASTTYACGFCSKQFDKRSTLDN
HLLNHYYTHFPDMRPFLCTTCGEYLFGIKQFITHLQEHFILCSVCFSLFK
SPEGFFLHYKSSHSNQIKCATCLELIPDCNTYLSHLKRHDFKIPVLTDEF
NHDKSDGYCCTVCDESFTSRLGFLNHFMQHSIQSADKNNNFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032708XLOC_032708Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051677TCONS_00051677Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 167..189
e-value: 48.0
score: 7.3
coord: 140..163
e-value: 6.9
score: 14.7
coord: 208..230
e-value: 0.018
score: 24.2
coord: 19..44
e-value: 7.9
score: 14.2
coord: 83..105
e-value: 0.084
score: 22.0
coord: 50..73
e-value: 29.0
score: 9.2
coord: 116..138
e-value: 7.9
score: 14.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 142..163
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 118..138
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 85..105
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 209..230
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 83..105
score: 10.076
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 208..235
score: 8.912
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 81..134
NoneNo IPR availableGENE3D3.30.160.60coord: 49..95
e-value: 1.2E-5
score: 25.1
NoneNo IPR availableGENE3D2.40.155.10coord: 141..240
e-value: 0.058
score: 13.0
NoneNo IPR availableGENE3D3.30.160.60coord: 96..140
e-value: 1.8E-5
score: 24.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051677-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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