TCONS_00051688-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051688-protein
Unique NameTCONS_00051688-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length435

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051688-protein ID=TCONS_00051688-protein|Name=TCONS_00051688-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
MALTFEDILENSKSNKFTIQVVIALSLQWFVPGAHQVLISNVAPYIQCQF
GLTNFEAALTGAAYFLGLNIGALYFGYMSDKRGRKASLVFAVLLMLYFAF
LNASSQSATFFSLTRLFVGIGVTATYLTTTTLTAEYVKVKHRSKDSQAFA
LFFIFGMMYAYLISYLVLNRYGWRVLTLILCTPGLFIALLLKIVPESFRY
LQTTNNEKKLMEILHRFARTNDVQIPSKLDLQCRESKNKASYRYVLKTYP
ITTCLFLIIWVGAMTCFYGSSFLLTYRLQNPVCRPVHHKQYLSATIATNS
TNNCTDILTDSAHLQSFLISLSMVPGSLIMYRLGLYGRKLFMQVGFALNL
ICYILQLFCIPDWLSIASLLILNSTATIFGTYGYLLTVEAYPTVVRSSAT
GMISSVGKISQVFIPFLFQFLIYESYLGVMWFLIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032719XLOC_032719Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051688TCONS_00051688Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005828MFS_sugar_transport-like
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0022857 transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 7..225
e-value: 2.7E-29
score: 101.4
coord: 229..435
e-value: 1.1E-12
score: 47.1
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 55..276
e-value: 1.1E-26
score: 93.7
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 21..435
score: 32.369
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 22..435
e-value: 1.17534E-19
score: 87.3693
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 9..281
coord: 312..434

Blast
[Close]
BLAST of TCONS_00051688-protein vs. Swiss-Prot (Human)
Match: SVOP (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.423e-40
Identity = 113/425 (26.59%), Postives = 202/425 (47.53%), Query Frame = 0 
Query:    6 EDILENSKSNKFTIQVVIALSLQWFVPGAHQVLISNVAPYIQCQFGLTNFEAALTGAAYFLGLNIGALYFGYMSDKRGRKASLVFAVLLMLYFAFLNASSQSATFFSLTRLFVGIGVTATYLTTTTLTAEYVKVKHRSKDSQAFALFFIFGMMYAYLISYLVLNRYGWRVLTLILCTPGLFIALLLKIVPESFRYLQTTNNEKKLMEILHRFARTNDVQIP-SKLDLQCRESKNKASYRYVLKTYPITTCLFLIIWVGAMTCFYGSSFLLTYRLQ-NPVCRPVHHKQYLSATIATNSTNNCTDILTDSAHLQSFLISLSMVPGSLI-MYRLGLYGRKLFMQVGFALNLICYILQLFCIPDWLSIASLLILNSTATIFGTY--GYLLTVEAYPTVVRSSATGMISSVGKISQVFIPFLFQFLIYES 425
            ED +E     KF  ++ +   L W       +++S +AP + C++ L +++ AL  +  F+G+   +  +G +SD+ GRK  L  +VL  LY+  L+A +   ++  + R  VG G+      + TL AE++ +K R+K      +F+  G ++  +++  V+   GWR L ++   P L  A+L   +PES RY   + N++K +  L R A  N   +P  KL +  +E + K    +    +  TT L   IW      +YG   L T   Q   VC     K+ + A  +        + L++  ++     +LS  PG L+ ++ +   GRK  M + F +   C +L   C+    ++ +LL+  + A I G +   Y+ T E YPT  R+   G  S + ++  +  PF+ Q ++  S
Sbjct:   71 EDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVP-QSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLIISRQEDRGKMRDLFT-PHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSL-----ACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGR--NVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESS 486
The following BLAST results are available for this feature:
BLAST of TCONS_00051688-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SVOP2.423e-4026.59Synaptic vesicle 2-related protein OS=Homo sapiens... [more]
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