TCONS_00051700-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051700-protein
Unique NameTCONS_00051700-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length455

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051700-protein ID=TCONS_00051700-protein|Name=TCONS_00051700-protein|organism=Clytia hemisphaerica|type=polypeptide|length=455bp
QVINKTKDSKLNIKKMKITVYFGLIFAIVRQTLSCPTECFCMDRKMTCQN
VILKEDDLANLQIPKDITELVLSSNELETISENTMTNLRHLETLEISDNA
FTKIPTFTFRGFSNLRRLVLSNNQITELTEGSFIGLDKCGHLDLKQNRIQ
QLQPGVFDKLALSIYEIHLEDNELKSLQNGVFPQLKFLKDLFLTRNEIKK
IDSQVFAQMRMEHLGLGSNQIQVIPSSAFEGFRIKTRINLLNNPLDCSCK
HAMGYKINFQHLRHKLWGHCKTPYHFEPYSTEIMNAHEELDHCSMCDLNP
CRNQGKCTGNKTSFKCACQERYKGQTCEVNICQGYTQKPEVSVIPDRIPL
KQINHTEVVIVQERINDEDDAKKLKILYAMCSFEFIVIICFVVYFMWKRY
EEWKLRKKYEHEKSRAILFSIRNQTNAQLAKALVEENEEFPADLKQMILK
GSVPV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032731XLOC_032731Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051700TCONS_00051700Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR001611Leu-rich_rpt
IPR032675L_dom-like
IPR013032EGF-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 210..231
e-value: 18.0
score: 11.1
coord: 185..208
e-value: 8.2
score: 14.0
coord: 136..159
e-value: 23.0
score: 10.3
coord: 88..111
e-value: 0.12
score: 21.5
coord: 58..87
e-value: 360.0
score: 0.5
coord: 112..135
e-value: 0.0082
score: 25.3
IPR000742EGF-like domainSMARTSM00181egf_5coord: 295..328
e-value: 2.4E-4
score: 30.5
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 294..328
score: 13.13
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 289..328
e-value: 0.0018
score: 24.0
NoneNo IPR availableGENE3D2.10.25.10coord: 294..331
e-value: 3.4E-9
score: 36.2
NoneNo IPR availableCDDcd00054EGF_CAcoord: 291..328
e-value: 9.58515E-6
score: 41.8534
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 291..335
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 89..149
e-value: 1.2E-14
score: 53.7
coord: 164..221
e-value: 1.3E-9
score: 37.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 210..231
score: 5.995
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 163..184
score: 4.693
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 114..135
score: 7.889
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 187..208
score: 6.187
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 138..159
score: 5.101
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 90..111
score: 6.788
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 66..87
score: 5.571
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 35..148
e-value: 9.0E-24
score: 83.1
coord: 149..271
e-value: 3.5E-16
score: 58.4
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 57..253
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 316..327

Blast
[Close]
BLAST of TCONS_00051700-protein vs. Swiss-Prot (Human)
Match: CHADL (Chondroadherin-like protein OS=Homo sapiens GN=CHADL PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.015e-20
Identity = 58/214 (27.10%), Postives = 97/214 (45.33%), Query Frame = 0 
Query:   35 CPTECFCM--DRKMTCQNVILKEDDLANLQIPKDITELVLSSNELETISENTMTNLRHLETLEISDNAFTKIPTFTFRGFSNLRRLVLSNNQITELTEGSFIGLDKCGHLDLKQNRIQQLQPGVFDKLALSIYEIHLEDNELKSLQNGVFPQLKFLKDLFLTRNEIKKIDSQVFAQMR-MEHLGLGSNQIQVIPSSAFEGFRIKTRINLLNNPL 245
            CP  C C+   R  +C+   L+         P D   L L  N   ++       L HL +L +      ++      G   L  L LS+NQ+  L+  +  G  + G+L L++NR  Q+ PG   +   S++ +HL+DN +  L  G   + + L+ ++L+ N I ++        R +E L L  NQ++ +P+ A EG      + L  NPL
Sbjct:  396 CPRACVCVPESRHSSCEGCGLQAVPRG---FPSDTQLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQV-PGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPL 605
The following BLAST results are available for this feature:
BLAST of TCONS_00051700-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHADL2.015e-2027.10Chondroadherin-like protein OS=Homo sapiens GN=CHA... [more]
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