TCONS_00051842-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051842-protein
Unique Name	TCONS_00051842-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	267

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051842-protein ID=TCONS_00051842-protein|Name=TCONS_00051842-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
MADSENSASSDNQENRSNNAANEAVGIQNFLMQDRSATVLWLIRLYIVVS
TFLYIVPLMGPDVSRNSYKRVLLGSAAISALRLHQRLPGIEFSMVFARRL
MVEDSLHYLLYSVLFLMAGSATMVLSPIFLFALMHASSYTKKVLNASGSN
GALAQKLHQYINKLTNSEMQRQIFLFVATNEIVVFVVSILMVISGQASML
VPFFYYRFLQLRYTSQRNPYSRMAFEQFRVAIIQLSNHPKCPGFARNLLI
SIISLAARLAPAAAPAQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032814	XLOC_032814	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051842	TCONS_00051842	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005344	TMEM33/Pom33

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005344	TMEM33/Pom33 family	PFAM	PF03661	UPF0121	coord: 26..262 e-value: 2.7E-73 score: 246.2

Blast

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BLAST of TCONS_00051842-protein vs. Swiss-Prot (Human)
Match: TMM33 (Transmembrane protein 33 OS=Homo sapiens GN=TMEM33 PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 7.650e-66
Identity = 104/240 (43.33%), Postives = 152/240 (63.33%), Query Frame = 0

Query:   23 EAVGIQNFLMQDRSATVLWLIRLYIVVSTFLYIVPLMGPDVSRNSYKRVLLGSAAISALRLHQRLPGIEFSMVFARRLMVEDSLHYLLYSVLFLMAGSATMVLSPIFLFALMHASSYTKKVLNASGSNGALAQKLHQYINKLTNSEMQRQIFLFVATNEIVVFVVSILMVISGQASMLVPFFYYRFLQLRYTSQRNPYSRMAFEQFRVAIIQLSNHPKCPGFARNLLISIISLAARLAPA 262
            +  G   F+M ++  T +WL RL+ V  + L+++PL+G   + + Y+R LL +A  SALRLHQRLP  + S  F  + ++EDS HYLLYS++F+ +   TM + P+ LF+L+HA++YTKKVL+A GSN      L   ++KL  S  Q+ I  F+A NEI +   ++ M+ SGQ S+L PF YYRFL LRY+S+RNPY R  F + R+ +  +   P CP F R L +  I+  +RLAP 
Sbjct:   10 QGAGAVQFMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLPHFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFSLLHAATYTKKVLDARGSNS--LPLLRSVLDKL--SANQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRFLTLRYSSRRNPYCRTLFNELRIVVEHIIMKPACPLFVRRLCLQSIAFISRLAPT 245

The following BLAST results are available for this feature:

BLAST of TCONS_00051842-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051842-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TMM33	7.650e-66	43.33	Transmembrane protein 33 OS=Homo sapiens GN=TMEM33...	[more]

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TCONS_00051842-protein (polypeptide) - C. hemisphaerica