TCONS_00052238-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052238-protein
Unique NameTCONS_00052238-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052238-protein ID=TCONS_00052238-protein|Name=TCONS_00052238-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MATTDNFEGIDPALIRQEQALEEYGLIDRVRLSEPLSGEDPSTATKSNNF
FYTYSLKGDGRRTTIVCVIFVLLFVGWTGYTLCEVILQPAENGKKTAEQH
HDHISKYSHPVCGKIQCAGDCSEKKRSRRVVSGADVRHGDWPWMAGLTLD
KKFRCGGVLVNELHVLTSAHCLYRRGEKLDSNQIQIFLGSVHRSEEKLEP
SKVRLAVKDLIIHKQFDPKTLENDIALVKLTDDVTFSKSIQPVCLPKYSA
DAPGYMLGWGKFKPDGPLSPKLQQVKMPLVTNQQCQKQNNKIFRRVKVHS
ENHICIGHGAQSPEYACAGDSGSGFFQQKKGMWFLQGLVSWIDPSCNSTL
HNTYTVLTNVAKYENWIGENIHL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033061XLOC_033061Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052238TCONS_00052238Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 156..171
score: 52.79
coord: 220..234
score: 39.33
coord: 314..326
score: 40.5
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 129..367
e-value: 1.7E-56
score: 203.7
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 131..367
e-value: 1.0E-51
score: 175.8
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 130..372
score: 27.923
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 130..367
e-value: 8.72524E-66
score: 209.825
NoneNo IPR availableGENE3D2.40.10.10coord: 161..240
e-value: 1.6E-26
score: 91.7
NoneNo IPR availableGENE3D2.40.10.10coord: 241..373
e-value: 8.6E-31
score: 106.4
NoneNo IPR availableGENE3D2.40.10.10coord: 130..160
e-value: 7.8E-13
score: 47.9
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 128..371

Blast
[Close]
BLAST of TCONS_00052238-protein vs. Swiss-Prot (Human)
Match: PRS48 (Serine protease 48 OS=Homo sapiens GN=PRSS48 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 4.000e-36
Identity = 88/261 (33.72%), Postives = 130/261 (49.81%), Query Frame = 0 
Query:  121 CSEKKRSRRVVSGADVRHGDWPWMAGLTLDKKFRCGGVLVNELHVLTSAHCLYRRGEKLDSNQIQIFLGSVHRSEEKLEPSKVRLAVKDLIIHKQFDPKTLENDIALVKLTDDVTFSKSIQPVCLPKYS---ADAP-GYMLGWGKFK--PDGPLSPKLQQVKMPLVTNQQCQKQNNKIFRRV----KVHSENHICIGHGAQSPEYACAGDSGSGFFQQKKGMWFLQGLVSWIDPSCNSTLHNTYTVLTNVAKYENWIGENI 371
            C +   S RVV G D   G WPW   L  D  F CGG LV+E  +LT+AHC+        +    ++LGS+   + +    +V+  V  ++IH ++   T   D+AL+KL+  VTF+ +I P+CLP  +   A  P  ++ GWGK K   D      LQ+ ++P++  Q C++  N I   +     V  E+ IC G   Q+ + +C GDSG        G+W   G+VSW    C  +L   Y   TNV  Y+ WI   I
Sbjct:   19 CGQPVYSSRVVGGQDAAAGRWPWQVSLHFDHNFICGGSLVSERLILTAAHCIQ---PTWTTFSYTVWLGSITVGDSR---KRVKYYVSKIVIHPKYQDTT--ADVALLKLSSQVTFTSAILPICLPSVTKQLAIPPFCWVTGWGKVKESSDRDYHSALQEAEVPIIDRQACEQLYNPIGIFLPALEPVIKEDKICAGD-TQNMKDSCKGDSGGPLSCHIDGVWIQTGVVSW-GLECGKSLPGVY---TNVIYYQKWINATI 266
The following BLAST results are available for this feature:
BLAST of TCONS_00052238-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRS484.000e-3633.72Serine protease 48 OS=Homo sapiens GN=PRSS48 PE=2 ... [more]
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