TCONS_00052257-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052257-protein
Unique NameTCONS_00052257-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length370

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052257-protein ID=TCONS_00052257-protein|Name=TCONS_00052257-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
SVKRKRKKERKTKMDIPANHNTTTNDIFTDTANNAINTILLMSASLLSTL
GTLVTITTYFFIKDIKTMSRHIIVCISVADLLTCLANLSGLLMSPTKHNT
SPVGCQVQSFLGTTAILSSFLWTLMLAVYLHMIIVEERIDQAKRLIIPWS
HVICWPVPLIINVVALTTGALGNDGDQTSAGWCWIKVTGAEHSTVVLWML
VDGKGLEILTYIVIVTLVIKMKLHLKIKIRNYSRTESPYGTFLTRKTMMV
AKQADRKLIFIPIILIILRIWGTIRFFIYLFNTGCTKDRLWLCQGLLYLH
TLGDNLQGAMNCILYCFFTPKVYNSIVQLLCNVCCRNTCCKCCTIGSRGG
TYESFETYTDDDEEDRNLLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033070XLOC_033070Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052257TCONS_00052257Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022343GCR1-cAMP_receptor
IPR017452GPCR_Rhodpsn_7TM
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022343GCR1-cAMP receptorPRINTSPR02001GCR1CAMPRcoord: 299..318
score: 29.26
coord: 48..66
score: 23.59
coord: 67..82
score: 17.82
coord: 105..123
score: 35.87
NoneNo IPR availablePFAMPF05462Dicty_CARcoord: 32..188
e-value: 1.7E-13
score: 50.3
NoneNo IPR availableGENE3D1.20.1070.10coord: 1..337
e-value: 2.0E-26
score: 92.0
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 29..339
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 51..315
score: 8.777
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 37..319
score: 19.461

Blast
[Close]
BLAST of TCONS_00052257-protein vs. Swiss-Prot (Human)
Match: GP157 (G-protein coupled receptor 157 OS=Homo sapiens GN=GPR157 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 4.705e-32
Identity = 81/230 (35.22%), Postives = 127/230 (55.22%), Query Frame = 0 
Query:  105 CQVQSFLGTTAILSSFLWTLMLAVYLHMIIVEE-RIDQAKRLIIPWS-HVICWPVPLIINVVALTTGALGNDGDQTSAGWCWIKVTGAEHSTVVLWMLVDGKGLEILTYIVIVTLVIKMKLHLKIKIRNYSRTE-SPYGTFLTRKTMMV--AKQADRKLIFIPIILIILRIWGTIRFFIYLFNTGCTKDRLWLCQGLLYLHTLGDNLQGAMNCILYCFFTPKVYNSIVQL 329
            C +Q  L T A  SSF WT+ +A+YL++ IV   R  +  RL+  W+ HV+ W VPL+I V A+    +G D    S GWCWI +   +H   VLWML+ GK  E+L Y+++  L + ++ H+     N + T  S Y   L+++  ++  +  AD+KL+ IP+I I LR+W T+RF + L  +   +  +     L+ LH +G+  QG  NCI++   T  V   +  L
Sbjct:   79 CVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRLL--WAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDH---VLWMLLTGKLWEMLAYVLLPLLYLLVRKHI-----NRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVWSTVRFVLTLCGSPAVQTPV-----LVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFSL 293
The following BLAST results are available for this feature:
BLAST of TCONS_00052257-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GP1574.705e-3235.22G-protein coupled receptor 157 OS=Homo sapiens GN=... [more]
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