TCONS_00052305-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00052305-protein
Unique Name	TCONS_00052305-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	855

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00052305-protein ID=TCONS_00052305-protein|Name=TCONS_00052305-protein|organism=Clytia hemisphaerica|type=polypeptide|length=855bp
MPAPRSSSVAHLNANRRITPSVPSPKRPTSRRIPTSYSQPNLQEYGRSLA
VATTSNKETVKKKVKKKKKKAALVANLAQTRYSLVKQVCSDYGFVISDHS
STDALLVWSDSAVPAEKISELRPYQKINHFAAMGEICRKDSLARNMWKVS
RHLPDDFDFVPNSWVLPGEYAMFQFHARENKKKKSKTFIRKPVNGAMGHG
IWLTRNIDKIQPNDTCIIQEYLDKPLLMDGYKFDLRIYVLVLSCDPLKVF
LYKDGLVRMSTTPYDPPSDSNVSDSYMHLTNYSINKHSENFIHTSLSEQG
TKRTLKYFWKWLHETAGNVETVWGSIKDVVNKTLLVAMPHIFHAYHMCRG
GDPKGSNCCFEVLGFDIFIDRKYKPWVLEVNRAPSFGTDQDLDYEIKYGV
LSSTLKLLNIKSSDKRHVLRAEKMEAQRRLVGTPGGRRSASGAELTTNRE
KIISKRKKELRWRLNQVRSEAKRKEYEEKTMGDFVRIYPPQTKELTEHYD
KLLCECTKAITGRKSLQKEHNPIHRLKEEEILDLLQEVENDVLHAIDEQG
RMIPRGPPPLSSMPSASPIKKRISPSTSTEKIGRASSTSRLSVRTKPNQT
LTSTARTKRPSSARLVRETFSAKVEKPVVDETRVNKTKEALKHLKEMKIK
FPGKSDEEAQSLLSTIQDNWKLHRPRVAAYWLVKLDALKRRKVIDIVKGN
VSLILQRMWQTTDIEALILYRMFAKLFNRLLWSHGQGLWNCFSATGDSWE
SIFLKSAETFLPVEIDCCRQVVKLCKDCLLVVYQFAAETTTIHLTSSMTS
SSSMTSPTPDTRLQCPHTPNNRKIPQSRSVMHSRKFSSTPSLNGASSHCS
RTYRL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033081	XLOC_033081	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00052305	TCONS_00052305	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004344	TTL/TTLL_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0006464	cellular protein modification process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 457..477
None	No IPR available	GENE3D	3.30.470.20		coord: 159..519 e-value: 5.5E-18 score: 64.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 798..855
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 550..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	SUPERFAMILY	56059	Glutathione synthetase ATP-binding domain-like	coord: 132..257 coord: 317..392
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PFAM	PF03133	TTL	coord: 122..409 e-value: 4.8E-76 score: 255.6
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PROSITE	PS51221	TTL	coord: 70..420 score: 50.964

Blast

[Close]

BLAST of TCONS_00052305-protein vs. Swiss-Prot (Human)
Match: TTLL7 (Tubulin polyglutamylase TTLL7 OS=Homo sapiens GN=TTLL7 PE=1 SV=2)

HSP 1 Score: 520.005 bits (1338), Expect = 7.024e-172
Identity = 262/507 (51.68%), Postives = 349/507 (68.84%), Query Frame = 0

Query:   71 AALVANLAQTRYSLVKQVCSDYGFVISDHSSTDALLVWSDSAVPAEKISELRPYQKINHFAAMGEICRKDSLARNMWKVSRHLPDDFDFVPNSWVLPGEYAMFQ-FHARENKKKKSKTFIRKPVNGAMGHGIWLTRNIDKIQPNDTCIIQEYLDKPLLMDGYKFDLRIYVLVLSCDPLKVFLYKDGLVRMSTTPYDPPSDSNVSDSYMHLTNYSINKHSENFIHTSLSEQGTKRTLKYFWKWLHETAGNVETVWGSIKDVVNKTLLVAMPHIFHAYHMCRGGDPKGS-NCCFEVLGFDIFIDRKYKPWVLEVNRAPSFGTDQDLDYEIKYGVLSSTLKLLNIKSSDKRHVLRAEKMEAQRRLVGTPGGRRSASGAELTTNREKIISKRKKELRWRLNQVRSEAKRKEYEEKTMGDFVRIYPPQTKELTEHYDKLLCECTKA-ITGR-KSLQKE-HNPIHRLKEEEILDLLQEVENDVLHAIDEQGRMIPRGPPPLSSMPSASPIKKR 572
              + AN+A T++ +V+ V  + GF+ +      + L+W DSAV  EKISEL+ YQ+INHF  MGEICRKD LARNM K+ +  P D+ FVP +W+ P EY  FQ +     KK+K KTFI KP NGAMGHGI L RN DK+   D  I+QEY++KP LM+GYKFDLRIY+LV SCDPLK+FLY DGLVRM T  Y PP++SN++  YMHLTNYS+NKH+E+F       +G+KR++K+F ++L     +V   W  I ++V KTL+VA PH+ HAY MCR G P GS + CFEVLGFDI +DRK KPW+LE+NRAPSFGTDQ +DY++K GVL + LKLLNI++SDKR  L  +K EAQRRL G    +R   G+     +   + +RK+EL+ RL QVR +  R+E+E + MG++ RIYPP+ K L E Y+ LL    +  ++GR  S Q+E +NP+ R+KEE+ILDLL++ E D    + +  +   RGP PL SMP ++ I KR
Sbjct:   39 GTITANVAGTKFEIVRLVIDEMGFMKTPDEDETSNLIWCDSAVQQEKISELQNYQRINHFPGMGEICRKDFLARNMTKMIKSRPLDYTFVPRTWIFPAEYTQFQNYVKELKKKRKQKTFIVKPANGAMGHGISLIRNGDKLPSQDHLIVQEYIEKPFLMEGYKFDLRIYILVTSCDPLKIFLYHDGLVRMGTEKYIPPNESNLTQLYMHLTNYSVNKHNEHFERDETENKGSKRSIKWFTEFLQANQHDVAKFWSDISELVVKTLIVAEPHVLHAYRMCRPGQPPGSESVCFEVLGFDILLDRKLKPWLLEINRAPSFGTDQKIDYDVKRGVLLNALKLLNIRTSDKRRNLAKQKAEAQRRLYGQNSIKRLLPGSSDWEQQRHQLERRKEELKERLAQVRKQISREEHENRHMGNYRRIYPPEDKALLEKYENLLAVAFQTFLSGRAASFQRELNNPLKRMKEEDILDLLEQCEIDDEKLMGKTTKT--RGPKPLCSMPESTEIMKR 543

HSP 2 Score: 201.445 bits (511), Expect = 7.179e-54
Identity = 85/152 (55.92%), Postives = 120/152 (78.95%), Query Frame = 0

Query:  637 TKEALKHLKEMKIKFPGKSDEEAQSLLSTIQDNWKLHRPRVAAYWLVKLDALKRRKVIDIVKGNVSLILQRMWQTTDIEALILYRMFAKLFNRLLWSHGQGLWNCFSATGDSWESIFLKSAETFLPVEIDCCRQVVKLCKDCLLVVYQFAAE 788
            T + L  LK+MKI+FPGKSD E++ L+  I DNWK H+ +VA+YWL+KLD++K+RKV+DIVK ++  +L R+W+  D+E + LYR+F ++FNRLLWS GQGLWNCF  +G SWESIF KS E   P+++ CC+++V+LCK CLLVVY++A +
Sbjct:  681 TSQTLFVLKDMKIRFPGKSDAESELLIEDIIDNWKYHKTKVASYWLIKLDSVKQRKVLDIVKTSIRTVLPRIWKVPDVEEVNLYRIFNRVFNRLLWSRGQGLWNCFCDSGSSWESIFNKSPEVVTPLQLQCCQRLVELCKQCLLVVYKYATD 832

The following BLAST results are available for this feature:

BLAST of TCONS_00052305-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00052305-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TTLL7	7.024e-172	51.68	Tubulin polyglutamylase TTLL7 OS=Homo sapiens GN=T...	[more]

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TCONS_00052305-protein (polypeptide) - C. hemisphaerica