TCONS_00052364-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052364-protein
Unique NameTCONS_00052364-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052364-protein ID=TCONS_00052364-protein|Name=TCONS_00052364-protein|organism=Clytia hemisphaerica|type=polypeptide|length=180bp
MSEETDLFLSHDWGEDGKTNHDRVKKINEAIKELGYITWFDNERMVGNMR
EQMAKGIDNTKCFIAFLTKRYHDKVVLGSDTDNCRTEFDYASSTVPMVAV
VLDASMRNPGEWKGNIGLTLKKFMYIDMSGDIETPLTCLNNSNFLQIIWM
SRVSSQIIKCKTLVLPRSRFPVQSKPWHQI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033105XLOC_033105Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052364TCONS_00052364Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000157TIR_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF13676TIR_2coord: 8..111
e-value: 2.6E-9
score: 37.2
IPR000157Toll/interleukin-1 receptor homology (TIR) domainGENE3D3.40.50.10140coord: 2..124
e-value: 2.7E-11
score: 43.3
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSUPERFAMILY52200Toll/Interleukin receptor TIR domaincoord: 4..133

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052364-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top