TCONS_00052497-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052497-protein
Unique NameTCONS_00052497-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052497-protein ID=TCONS_00052497-protein|Name=TCONS_00052497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
FNDFFSSIGKNLASKIPNSNKDVLSYIEDYDKNMSSEPLTIEELDQAFKS
LKSNKSPGIDEVDTNVVQNAYEIIKPCLYHIFDLSLKQGIFPNDMKIAKV
TPIFKSGEKDEPGNYRPISVLPCFSKLLERIMYNRLYEYLTTNKLLYQKQ
FGFQRKHSTEHALLGLIDGIADSFEKNEFTIGVFIDLSKAFDTVDH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033195XLOC_033195Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052497TCONS_00052497Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 109..196
e-value: 1.4E-16
score: 60.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 84..196
score: 9.429
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 98..196
e-value: 5.11306E-30
score: 110.073
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 21..196

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052497-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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