TCONS_00052541-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052541-protein
Unique NameTCONS_00052541-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length521

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052541-protein ID=TCONS_00052541-protein|Name=TCONS_00052541-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
MEINLIKESCLNGKCIYDCINDDTHERIIEKDSLKQILETLHLNSKLRPH
YPCVVKLVNVSLHQNFNTSVTDFEAYSDAETIEILTTLCLLPDVCYPLKL
QHDSTDNEEFETNHKLNPKLSYQCLLCCKTILFERKVDSESILKYQKRLL
KKVAPYLVLLISSRLGNFSWCTNELTKECNEILQFICKVTKHETVKSLFA
GDVENSNVLFPRGIFGFALEKLSLVFTKDNWRKNLPWKHSLIWCATKVSF
PCLGEYLPHFIPFLLLMVDDLVEDNKICGFSTLLYVMHNVTASDLNLYNY
GKVIYDALFQQLFSNSDRLYEIVLPCLNKVLQILEKGNIVHPNWTLWDTT
LEKIIHNLEFSNRIKTRRLFLKYLPMFLNEMGANCMKHLESLFKALQFVA
QFVDIEGEQTRLLVLNAYQKVIRHCWIALKRHHKQLLKTHTKLYLDIKFS
GILKNDKILNELLTQNLILLRSSCGEEFDKSLKEMTALEMDEPHSKALQS
LIRSVINVDLDKFDLSSIKLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033225XLOC_033225Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052541TCONS_00052541Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR018870Tti2
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 219..516
e-value: 0.0011
score: 17.1
coord: 31..201
e-value: 0.11
score: 10.5
IPR018870Tti2 familyPFAMPF10521Tti2coord: 229..396
e-value: 2.1E-9
score: 37.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 249..480

Blast
[Close]
BLAST of TCONS_00052541-protein vs. Swiss-Prot (Human)
Match: TTI2 (TELO2-interacting protein 2 OS=Homo sapiens GN=TTI2 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.337e-28
Identity = 81/287 (28.22%), Postives = 137/287 (47.74%), Query Frame = 0 
Query:  145 YQKRLLKKVAPYLVLLISSRLGNFSWCTNELTKECNEILQFICKVTKHETVKSLFAGDVENSNVLFPRGIFGFALEKLSLVFTKDNWRKNLPWKHSLIWCATKVSFPCLGEYLPHFIPFLLLMVDDLVEDNKICGFSTLLYVMHNVTASDLNLYNYGKVIYDALFQQLFSNSDRLYEIVLPCLNKVLQILE-----KGNIVHPNWTLWDTTLEKIIHNLEFSNRIKTRRLFLKYLPMFLNEMGANCMKHLESLFKALQFVAQFVDIEGEQTRLLVLNAYQKVIRHCW 426
            +Q  L     P  +  I+  L    W T    +   E+L  + +VT+  +V     G+ E+      +G     L  L     K++W+ N   KH   W   +V+ P L ++L   +P  L++ DD   +NKI G   L +++ NV A+DL  YN  +V+Y A+   L++    L + VL CL  +  ILE     KG+   P  T  D  L  I+ ++E  +R+  RR + + LP F+N +G   ++HL+ L + +    +  D   E+ RL +L   + +++H W
Sbjct:  139 WQTGLHHLAGPVYIFAITHSLEQ-PWTTPRSREVAREVLTSLLQVTECGSVAGFLHGENEDE-----KGRLSVILGLLKPDLYKESWKNNPAIKHVFSWTLQQVTRPWLSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHLYTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGARPT-THCDEVLRLILTHMEPEHRLLLRRTYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTW 418
The following BLAST results are available for this feature:
BLAST of TCONS_00052541-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTI22.337e-2828.22TELO2-interacting protein 2 OS=Homo sapiens GN=TTI... [more]
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