TCONS_00052757-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052757-protein
Unique NameTCONS_00052757-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length365

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052757-protein ID=TCONS_00052757-protein|Name=TCONS_00052757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
MTTERVANFLAGPSSLPVEVLQQAASEMLNYRKQGFGVMEMSHRSKEFAE
ICTEAEADMRKLMNMPKEYKVLFLQGGCTGMFAAVAMNFLKGKADYICTG
TWSEKAAKEAEKYGQVNYVVPKPEKYLGVPSTDQWKLSPDADYVYYCFNE
TVGGVEFENIPETNGVPLIVDMSSNIMTRKIDITKFAAVIAGAQKNLGPA
GLTMVIAREDMLGKEQKICPTVWNFKKQADADSRLNTPPCYCIYMTGLVF
KWILKNGGVDYFHDLNTKKSKLLYDTIDDSLGFYKPIINEGSRSRVNIVF
RVGGPQGDIDVEKKFVEKAKENGLVGLSGHRSVGGCRASLYNPVTLEQVQ
KLCKFMNDFQMQNQN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033357XLOC_033357Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052757TCONS_00052757Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022278Pser_aminoTfrase
IPR000192Aminotrans_V_dom
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015422PyrdxlP-dep_Trfase_sub2
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Biological Process
TermDefinition
GO:0006564L-serine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004648O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006564 L-serine biosynthetic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022278Phosphoserine aminotransferaseTIGRFAMTIGR01364TIGR01364coord: 7..362
e-value: 4.6E-144
score: 477.7
IPR022278Phosphoserine aminotransferasePIRSFPIRSF000525SerCcoord: 1..364
e-value: 5.7E-138
score: 457.7
IPR022278Phosphoserine aminotransferaseHAMAPMF_00160SerC_aminotrans_5coord: 4..363
score: 44.304
IPR000192Aminotransferase class V domainPFAMPF00266Aminotran_5coord: 8..352
e-value: 5.5E-44
score: 150.5
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 18..256
e-value: 8.8E-32
score: 109.7
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 257..362
e-value: 2.0E-32
score: 111.0
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 4..359

Blast
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BLAST of TCONS_00052757-protein vs. Swiss-Prot (Human)
Match: SERC (Phosphoserine aminotransferase OS=Homo sapiens GN=PSAT1 PE=1 SV=2)

HSP 1 Score: 370.163 bits (949), Expect = 2.454e-127
Identity = 179/365 (49.04%), Postives = 244/365 (66.85%), Query Frame = 0 
Query:    4 ERVANFLAGPSSLPVEVLQQAASEMLNYRKQGFGVMEMSHRSKEFAEICTEAEADMRKLMNMPKEYKVLFLQGGCTGMFAAVAMNFLKGKA----DYICTGTWSEKAAKEAEKYGQVNYVVPKPEKYLGVPSTDQWKLSPDADYVYYCFNETVGGVEFENIPETNGVPLIVDMSSNIMTRKIDITKFAAVIAGAQKNLGPAGLTMVIAREDMLGKEQKICPTVWNFKKQADADSRLNTPPCYCIYMTGLVFKWILKNGGVDYFHDLNTKKSKLLYDTIDDSLGFYKPIINEGSRSRVNIVFRVGGPQGDIDVEKKFVEKAKENGLVGLSGHRSVGGCRASLYNPVTLEQVQKLCKFMNDFQMQNQ 364
             +V NF  GP+ LP  VL +   E+L+Y+  G  V+EMSHRS +FA+I    E  +R+L+ +P  YKV+FLQGG  G F+AV +N +  KA    DY+ TG WS KAA+EA+K+G +N V PK   Y  +P    W L+PDA YVYYC NETV GVEF+ IP+  G  L+ DMSSN +++ +D++KF  + AGAQKN+G AG+T+VI R+D+LG   + CP+V  +K QA   S  NTPPC+ IY+ GLV +WI  NGG      L++ KS+ +Y+ ID+S GFY   +   +RS++NI FR+G  +GD  +EK+F++KA E  ++ L GHRSVGG RASLYN VT+E VQKL  FM  F   +Q
Sbjct:    5 RQVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMHQ 369
The following BLAST results are available for this feature:
BLAST of TCONS_00052757-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SERC2.454e-12749.04Phosphoserine aminotransferase OS=Homo sapiens GN=... [more]
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