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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00052779-protein ID=TCONS_00052779-protein|Name=TCONS_00052779-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1319bp
MKNFNESVFNSKLTDIKKPIKVFARVRPFNDDEIGRCEKQAVETFDDEKR
IKVLDERHSQEMTYHFDGVFAGKDNNQKVYQMTTKPLLRTFLNGINCAVL
TYGQTGSGKTYTAMADGCITEFAIEELFDLMKLDVLHEYKIYCSFVQIYL
EKIYDLFNDDNHDELLVREHPKKGLYVENLTHEEVGCRQDIFALLKKGKE
LLVTAETNMVRHSSRSHSVFQITIERRKIKAKEVSSQTPDGRDSSFIFEE
LIVLEDEITLKAKMQICDLAGSERLAKTMVEGVNQVEARHINSSLLELGN
VINSLSSGKVTHVPFRNSTLTRLLQECLGSKCLTSFIVCVAPSASESYET
RCSLNFGARARTITNKERVTLNVEVDYRILARKMSKRIEELEKELNSSGK
HFSTITSQNQIHHNNTTPSHKDQWSELNQTLLISELLDTVLETEEEQPQL
VHQGYRLSHLRLTNIINIVLKRLKDIPNKIQDSPRTYPSSLEDLKRQIIN
ETKQKLRFLLGELHSIDVGDSDDLFRESAYSINETCTDIENALWDFLKSV
SSSTRRLNNNEHTNSFYQVVEMAITDLKNASRDTSADLLDTQYLFYILQM
LQVIRLFLECNLRKHLISGNQLKATSAESVNLQQDSYSLMNSTFSSPDFP
KESPESVIDQDSPIDQDSTSKNTPSPRKLQRSPAFKIKKDQDTETPLGVP
FKHLSSSHLPKTIFNDQHQDSDDGVVTMSSQDETGYVSLQEEHGMLQQMY
TKAMQENERLKDANAFMQQKLSTLVNLKHREVFGSSFDIDKEKEPASIDK
HNLYNKLFYEEMSFDQLNELTSNSFEISTGQQPIYNHQAKDVSALESDNN
LLQAENKALLMERNELKRKMVDFEEYIEENSLKCKQLETDLKLIENQNNT
LLDQVVYLCGTLDVVKHLETTHRLPANKDELGLLESDLFFMIDQNVRYES
ALMEIKFKVTKHKDKITIDSTPSKMDILKRESSSSPYNDVITPESTSGKS
GNKSKRSITTRASNSRASSPLVKKAIELKRDHRETVKNLRKESGGDHLTT
LSKEVKTCRTTRTKELLQERLLMTQKITTLEKELVSKDEELEKNKLHVEL
LTQELGQIDLDSMNGLTPVKTSKTNGLTSNGAQDEIAHRESTFVKDSATK
SDIKAVVGQNCVDISVPVGENDDIEIIEIPEIKYEDLMAFIRGEKKADLA
SPLGPAINDFDSSKNRRLIEREFKTQVVSLERANECLRESNTALTDELHL
VRSLNRDQKEKIKELKFEIVRVNSEADTLKCQLKINQSGFENSRLKYEKQ
ISSMRKQIVQQCYQEQQKL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003777 | microtubule motor activity |
| GO:0008017 | microtubule binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007018 | microtubule-based movement |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007018 |
microtubule-based movement |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0008017 |
microtubule binding |
| molecular_function |
GO:0003777 |
microtubule motor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 374..401 |
| None | No IPR available | COILS | Coil | Coil | coord: 1227..1247 |
| None | No IPR available | COILS | Coil | Coil | coord: 1022..1042 |
| None | No IPR available | COILS | Coil | Coil | coord: 750..770 |
| None | No IPR available | COILS | Coil | Coil | coord: 877..904 |
| None | No IPR available | COILS | Coil | Coil | coord: 1255..1282 |
| None | No IPR available | COILS | Coil | Coil | coord: 842..869 |
| None | No IPR available | GENE3D | 1.20.5.340 | | coord: 831..976
e-value: 1.8E-4
score: 20.8
coord: 380..777
e-value: 0.058
score: 12.7 |
| None | No IPR available | GENE3D | 1.20.5.1000 | | coord: 1221..1318
e-value: 0.074
score: 12.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 641..702 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 402..422 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 977..1021 |
| None | No IPR available | CDD | cd00106 | KISc | coord: 19..361
e-value: 3.8348E-95
score: 308.415 |
| IPR001752 | Kinesin motor domain | PRINTS | PR00380 | KINESINHEAVY | coord: 207..224
score: 55.79
coord: 313..334
score: 49.85
coord: 94..115
score: 54.7 |
| IPR001752 | Kinesin motor domain | SMART | SM00129 | kinesin_4 | coord: 17..371
e-value: 1.7E-101
score: 353.1 |
| IPR001752 | Kinesin motor domain | PFAM | PF00225 | Kinesin | coord: 25..363
e-value: 1.2E-86
score: 290.6 |
| IPR001752 | Kinesin motor domain | GENE3D | 3.40.850.10 | | coord: 11..376
e-value: 2.7E-100
score: 335.0 |
| IPR001752 | Kinesin motor domain | PROSITE | PS50067 | KINESIN_MOTOR_2 | coord: 19..363
score: 90.259 |
| IPR019821 | Kinesin motor domain, conserved site | PROSITE | PS00411 | KINESIN_MOTOR_1 | coord: 262..273 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 19..401 |
Blast
BLAST of TCONS_00052779-protein vs. Swiss-Prot (Human)
Match: KIF3A (Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3A PE=1 SV=4) HSP 1 Score: 206.068 bits (523), Expect = 2.396e-55 Identity = 137/387 (35.40%), Postives = 191/387 (49.35%), Query Frame = 0
Query: 20 IKVFARVRPFNDDEIGRCEKQAVETFDDEKR----IKVLDERHSQEMTYHFDGVFAGKDNNQKVYQMTTKPLLRTFLNGINCAVLTYGQTGSGKTYTAMADGCITEF------AIEELFD-LMKLDVLHEYKIYCSFVQIYLEKIYDLFNDDNHDELLVREHPKKGLYVENLTHEEVGCRQDIFALLKKGKELLVTAETNMVRHSSRSHSVFQITIERRKIKAKEVSSQTPDGRDSSFIFEELIVLEDEITLKAKMQICDLAGSERLAKTMVEGVNQVEARHINSSLLELGNVINSLSSGKVTHVPFRNSTLTRLLQECLGSKCLTSFIVCVAPSASESYETRCSLNFGARARTITNKERVTLNVEVDYRILARKMSKRIEELEKEL 395
+KV R RP N+ E C KQAV DE R + D + T+ FD VF + VY +T +P++ + L G N + YGQTG+GKT+T I E + +F + K + + + S+++IY E++ DL D L V+E P G+Y+++L+ V D+ ++ G + TNM HSSRSH++F ITIE S + DG + K+ + DLAGSER AKT G EA IN SL LGNVI++L GK THVP+RNS LTRLLQ+ LG T + P+ ET +L + RA+ I NK R+ E L R+ K IEEL+K+L
Sbjct: 15 VKVVVRCRPLNEREKSMCYKQAVSV--DEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAIPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIE--------CSEKGIDGNMHVRM--------------GKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARIN---EDPKDALLRQFQKEIEELKKKL 374
The following BLAST results are available for this feature:
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