TCONS_00052805-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052805-protein
Unique NameTCONS_00052805-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length589

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052805-protein ID=TCONS_00052805-protein|Name=TCONS_00052805-protein|organism=Clytia hemisphaerica|type=polypeptide|length=589bp
MDSPEYGHPQTVKFHHDLNLIEEFNDARQQGPADSETMECFDTVEDVITN
LFDSVSSNENLAVSRNLSKLNSVLHNQKFQALLNIYSRSRTAMNAFNIQD
NRKNAEESLYEVTVMLNSLNDYDNKIQELKDILAKPHVQSVIKTHDTIIR
EMQGKNNIFKKSTNHDQSLQLSSNQLAENVTRVRLVQFPKNPNEPMGITL
KKTDKKECLVARVIHGGMIHRQGTLHVGDEIKEINGINTSMCSVERLQQI
LRDASGDVTFKIVPGCQNEDRASKEVYFKCLYDYDPRADDMIPCQQAGLS
FQCGDVLEVVCKADMHWWQARKVGTKNVGLVPSTELQEQRIRKMVIERNK
GEGAITCLWPKKTNKKSKVNRYTARLNTAFDRLNLVTYEEVIQQKKTYHK
TIVLIGAHGVGRRHIKNSLVSRFPEKYASPVPHTSRRQSPNEKHGELWFF
ETEDRMLKDIGSHQYLEYGKHDGHLYGTKLSSVQDLIKNDRTPVLDIETP
ALKILRCKEFFPYIIFVSSPISYPESGDPKMDASLQRLIADSTDLKNRYQ
HFFDYTVINETIDETVEKIVDHLEELAGSSAWIPASWYY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033374XLOC_033374Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052805TCONS_00052805Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR001452SH3_domain
IPR004172L27_dom
IPR008145GK/Ca_channel_bsu
IPR014775L27_C
IPR008144Guanylate_kin-like_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 194..266
e-value: 2.4E-13
score: 60.3
IPR001478PDZ domainPFAMPF00595PDZcoord: 186..262
e-value: 1.0E-14
score: 54.5
IPR001478PDZ domainPROSITEPS50106PDZcoord: 185..266
score: 14.536
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 179..265
IPR001452SH3 domainSMARTSM00326SH3_2coord: 276..340
e-value: 6.5E-11
score: 52.3
IPR001452SH3 domainPFAMPF00018SH3_1coord: 281..333
e-value: 5.8E-7
score: 28.9
IPR001452SH3 domainPROSITEPS50002SH3coord: 273..341
score: 13.319
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 250..369
IPR004172L27 domainSMARTSM00569L27_neu3coord: 105..159
e-value: 1.9E-4
score: 30.8
IPR004172L27 domainGENE3D1.10.287.650coord: 34..90
e-value: 0.022
score: 14.2
coord: 104..155
e-value: 5.4E-6
score: 25.7
IPR004172L27 domainPROSITEPS51022L27coord: 98..156
score: 10.596
IPR004172L27 domainSUPERFAMILY101288L27 domaincoord: 104..152
IPR008145Guanylate kinase/L-type calcium channel beta subunitSMARTSM00072gk_7coord: 398..577
e-value: 3.5E-43
score: 159.5
IPR008145Guanylate kinase/L-type calcium channel beta subunitPFAMPF00625Guanylate_kincoord: 399..575
e-value: 8.7E-40
score: 136.2
IPR014775L27 domain, C-terminalPFAMPF02828L27coord: 111..148
e-value: 1.2E-7
score: 31.3
NoneNo IPR availableGENE3D2.30.42.10coord: 165..270
e-value: 3.1E-17
score: 62.0
NoneNo IPR availableGENE3D3.40.50.300coord: 388..586
e-value: 2.1E-43
score: 147.9
NoneNo IPR availableGENE3D2.30.30.40coord: 271..387
e-value: 4.3E-18
score: 65.2
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 183..263
e-value: 6.43806E-17
score: 75.2958
IPR008144Guanylate kinase-like domainPROSITEPS50052GUANYLATE_KINASE_2coord: 399..574
score: 33.822
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 399..585

Blast
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BLAST of TCONS_00052805-protein vs. Swiss-Prot (Human)
Match: CSKP (Peripheral plasma membrane protein CASK OS=Homo sapiens GN=CASK PE=1 SV=3)

HSP 1 Score: 429.098 bits (1102), Expect = 5.567e-140
Identity = 230/614 (37.46%), Postives = 365/614 (59.45%), Query Frame = 0 
Query:   24 FNDARQQGPADSE--TMECFDTVEDVITNLFDSVSSNENL--AVSRNLSKLNSVLHNQKFQALLNIYSRSRTAMNAFNIQDNRKNAEESLYEVTVMLNSLNDY--DNKIQELKDILAKPHVQSVIKTHDTIIREMQGKNNI------FKKSTNHDQSLQLSSNQLAENVTRVRLVQFPKNPNEPMGITLKKTDKKECLVARVIHGGMIHRQGTLHVGDEIKEINGINTSMCSVERLQQILRDASGDVTFKIVPG-------CQNEDRAS---------------------------KEVYFKCLYDYDPRADDMIPCQQAGLSFQCGDVLEVVCKADMHWWQARKVGTKN--VGLVPSTELQEQRIRKMVIERNKGEGAITCLWPKKTNKKSKVNRYTARLNTAFDRLNLVTYEEVIQQKKTYHKTIVLIGAHGVGRRHIKNSLVSRFPEKYASPVPHTSRRQSPNEKHGELWFFETEDRMLKDIGSHQYLEYGKHDGHLYGTKLSSVQDLIKNDRTPVLDIETPALKILRCKEFFPYIIFVSSPISYPESGDPKMDASLQRLIADSTDLKNRYQHFFDYTVINETIDETVEKIVDHLEELAGSSAWIPASWYY 589
            + D  ++ P  SE  T       E  ++ + DS+     L     ++L  L+SV  +Q    LL++Y +  T  +   I++   +A +   EV   L  ++ Y  +N  +ELK IL +PH  ++++THD +  E+     +           N D     + +   ENVTRVRLVQF KN +EPMGITLK  +   C+VAR++HGGMIHRQGTLHVGDEI+EINGI+ +  +VE+LQ++LR+  G +TFKIVP        C+ +  ++                           +++Y +  ++YDP  DD+IPC++AG+ F+ GD+++++ K D +WWQ +   +KN   GL+PS ELQE R+  + +E+ K E   +C W     KK   ++Y A+ N  FD+L+LVTYEEV++      KT+VL+GAHGVGRRHIKN+L+++ P+++A P+PHT+R    +E++G+ ++F + D+M++DI +++YLEYG H+  +YGTKL +++ + +     +LD+E  ALK+LR  EF P+++F+++P   P   +   D SLQRL  +S  L+  Y H+FD T+IN  IDET+  + + +E +  +  W+P SW Y
Sbjct:  321 YGDPPEELPDFSEDPTSSGLLAAERAVSQVLDSLEEIHALTDCSEKDLDFLHSVFQDQHLHTLLDLYDKINTKSSP-QIRNPPSDAVQRAKEV---LEEISCYPENNDAKELKRILTQPHFMALLQTHDVVAHEVYSDEALRVTPPPTSPYLNGDSPESANGDMDMENVTRVRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRTQSSSCERDSPSTSRQSPANGHSSTNNSVSDLPSTTQPKGRQIYVRAQFEYDPAKDDLIPCKEAGIRFRVGDIIQIISKDDHNWWQGKLENSKNGTAGLIPSPELQEWRVACIAMEKTKQEQQASCTW-FGKKKKQYKDKYLAKHNAVFDQLDLVTYEEVVKLPAFKRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAMYGTKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLNE---DESLQRLQKESDILQRTYAHYFDLTIINNEIDETIRHLEEAVELVCTAPQWVPVSWVY 926
The following BLAST results are available for this feature:
BLAST of TCONS_00052805-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CSKP5.567e-14037.46Peripheral plasma membrane protein CASK OS=Homo sa... [more]
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