TCONS_00052814-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00052814-protein
Unique Name	TCONS_00052814-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	602

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00052814-protein ID=TCONS_00052814-protein|Name=TCONS_00052814-protein|organism=Clytia hemisphaerica|type=polypeptide|length=602bp
MAAIDDSFKFEDTTLLEQLFSQKEGLLNENNHLFCKEYLENLSSYGLSKL
AHEPETLREEHSNITQQTQNLAFNNYSTFIQAAECSKEIYKDFNIVEEHL
DSVEVNLPKFANTIEHFSKSSQEINACRKQNSLVLSRHTQLLEVLEISQL
MDTCVRNGYYEEALELANYVKRLERKFSQIKIITDIAVEVKRSTQYMLSQ
LLQQLKGNVQLPACLRIISYIRQLEVFTEAELRIKFLQGRDAWFQSVLSQ
IPRDDIYTHMTKVIDASRVSLFDIITQYNAIFSDNEPIYSSNDDKRQSNA
PILHSWVLHKLSNFLTTLDEGISKGLHGRLDSLFGQTMYFGLSFSRIGAD
FRGLIVSLFIKHTLKIFRAKIRQVTQNFEDDMSTYTARSIKREYQSASSQ
SKAGNDPCIPPHELLDFPPMACYLNGVLGALNEFRQFPSLTLVFQMKKCL
LNSLEKVMLSLENWARLESKSLPKEQSEDVKYLCYIVCRHFLPYIRTVFS
SVFSLNSVQEMMGRTPQSVNSTQFKDMFTLDIGSLQNHLKEFVDLYKITS
EIEQIENPKSVNDGKTSISLVVDDKNEISNLPDSVSDKLRNVDNEILPNE
SK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033377	XLOC_033377	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00052814	TCONS_00052814	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007255	COG8
IPR016159	Cullin_repeat-like_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0017119	Golgi transport complex

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0017119	Golgi transport complex

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007255	Conserved oligomeric Golgi complex subunit 8	PFAM	PF04124	Dor1	coord: 40..375 e-value: 2.4E-103 score: 345.3
IPR016159	Cullin repeat-like-containing domain	SUPERFAMILY	74788	Cullin repeat-like	coord: 140..362

Blast

[Close]

BLAST of TCONS_00052814-protein vs. Swiss-Prot (Human)
Match: COG8 (Conserved oligomeric Golgi complex subunit 8 OS=Homo sapiens GN=COG8 PE=1 SV=2)

HSP 1 Score: 453.366 bits (1165), Expect = 5.624e-153
Identity = 231/535 (43.18%), Postives = 330/535 (61.68%), Query Frame = 0

Query:    9 KFEDTTLLEQLFSQKEGLLNENNHLFCKEYLENLSSYGLSKLAHEPETLREEHSNITQQTQNLAFNNYSTFIQAAECSKEIYKDFNIVEEHLDSVEVNLPKFANTIEHFSKSSQEINACRKQNSLVLSRHTQLLEVLEISQLMDTCVRNGYYEEALELANYVKRLERKFSQIKIITDIAVEVKRSTQYMLSQLLQQLKGNVQLPACLRIISYIRQLEVFTEAELRIKFLQGRDAWFQSVLSQIPRDDIYTHMTKVIDASRVSLFDIITQYNAIFSDNEPIYSSNDDKRQSN-APILHSWVLHKLSNFLTTLDEGISKGLHGRLDSLFGQTMYFGLSFSRIGADFRGLIVSLFIKHTLKIFRAKIRQVTQNFEDDMSTY---TARSIKREYQSASSQSKAGNDPCIPPHELLDFPPMACYLNGVLGALNEFRQFPSLTLVFQMKKCLLNSLEKVMLSLENWARLESKSLPKEQSEDVKYLCYIVCRHFLPYIRTVFSSVFSLNSVQEMMGRTPQSVNSTQFKDMFTLDIGSLQNHL 539
            + ED  LL  LF  +              YL  LS  GL +L  EPE L EE + + QQT++LAF NY TFI+ AEC++ I++ F  VE  L  +   LP F  +  +F K ++EI++ R+ NSL L+RHT++LE+LEI QLMDTCVRN YYEEALELA YV+RLERK+S I +I  I  EV++S Q MLSQL+QQL+ N+QLPACLR+I Y+R+++VFTEAELR+KFLQ RDAW +S+L+ IP DD Y H+TK I+ASRV LFDIITQY AIFSD +P+      +   N + I H WVL K+S FL  L+  + +G+ G LDSL GQ MYFGLSFSR+GADFRG +  +F +  +  F+  I++  + F+++M++Y   +A +I       ++          PP  LLDFPP+AC+LN +L A N+ R    + L   +   L ++L KV   +  + R E  +    + E     C +     +PY+      +F    + + +G  P  +  +++ ++  ++IG++Q  L
Sbjct:   20 EVEDEGLLASLFRDRFPEAQWRERPDVGRYLRELSGSGLERLRREPERLAEERAQLLQQTRDLAFANYKTFIRGAECTERIHRLFGDVEASLGRLLDRLPSFQQSCRNFVKEAEEISSNRRMNSLTLNRHTEILEILEIPQLMDTCVRNSYYEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQLIQQLRTNIQLPACLRVIGYLRRMDVFTEAELRVKFLQARDAWLRSILTAIPNDDPYFHITKTIEASRVHLFDIITQYRAIFSDEDPLLPPAMGEHTVNESAIFHGWVLQKVSQFLQVLETDLYRGIGGHLDSLLGQCMYFGLSFSRVGADFRGQLAPVFQRVAISTFQKAIQETVEKFQEEMNSYMLISAPAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALAQDVTGALEDALAKVTKIILAFHRAEEAAFSSGEQELFVQFCTVFLEDLVPYLNRCLQVLFPPAQIAQTLGIPPTQL--SKYGNLGHVNIGAIQEPL 552

The following BLAST results are available for this feature:

BLAST of TCONS_00052814-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00052814-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
COG8	5.624e-153	43.18	Conserved oligomeric Golgi complex subunit 8 OS=Ho...	[more]

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TCONS_00052814-protein (polypeptide) - C. hemisphaerica