TCONS_00052817-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052817-protein
Unique NameTCONS_00052817-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length604

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052817-protein ID=TCONS_00052817-protein|Name=TCONS_00052817-protein|organism=Clytia hemisphaerica|type=polypeptide|length=604bp
MVESDFTMVGASRRKTRLPRKILRVKQDDGHVKLEPQENCYKSDDQMMES
DDIPSPSSSPQSNDQYNDSFYDKYDTNRYNTAYVGGEYLKEATKLFLKSQ
TTSDYIVVQPSYDDQPPVISSEPDVKISSPPRDDHDVRDTREHGDRIKTY
NPVKKQYYQKHHIPNLTKKHHHPEPTPDNPYQCETCDMLFKNLELLSDHQ
KTVHDNNRQFACRYCGKRFNDKYNMRKHVLIHVGEKRHKCQFCEKAFLRK
DHLRSHLQTHYNRKYGCKLCGKSFKTIELYHRHVKTHKELDHLSEINNLE
NLLPELERYDSPKLDRYSPKLDRYDSPKLDRYDSPIPSSRPTHHHYTPAP
EITRELIAPPVVKHERMNERLDDSRGEDSPWNRSGSPTYSDISGSSFSQS
SPRGMDYGSANENTDVLKRVLSYRCGFCNATFEDKESVTIHERKCRAETQ
KWQCVKCNIVFDEPGTLKQHYEKVHSTEKPVQSPSRWRCKTCDINYPNSK
ELSRHYASAHKDAQIFPCSECPKTFTVWHNLKKHMLIHLGDKKHKCTVCD
KGFVRKDHLNSHMKVHLGDGSKYTCPICMKVFRLKQMYIKHMNLHGLEQA
QQPV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033379XLOC_033379Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052817TCONS_00052817Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 487..510
e-value: 0.54
score: 19.3
coord: 423..443
e-value: 28.0
score: 9.3
coord: 544..566
e-value: 2.2E-4
score: 30.6
coord: 181..204
e-value: 0.017
score: 24.3
coord: 238..260
e-value: 0.019
score: 24.2
coord: 210..232
e-value: 5.2E-4
score: 29.3
coord: 265..287
e-value: 0.018
score: 24.2
coord: 573..595
e-value: 0.009
score: 25.2
coord: 452..475
e-value: 0.14
score: 21.3
coord: 516..538
e-value: 5.3E-4
score: 29.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 267..287
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 240..260
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 518..538
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 575..595
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 212..232
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 546..566
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 183..204
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 454..475
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 516..543
score: 12.986
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 181..209
score: 11.157
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 265..287
score: 10.492
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 573..600
score: 10.284
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 544..571
score: 12.653
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 210..237
score: 13.651
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 238..265
score: 11.863
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 452..480
score: 12.009
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 553..595
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 169..219
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 515..566
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 263..287
coord: 418..443
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 204..256
NoneNo IPR availableGENE3D3.30.160.60coord: 276..311
e-value: 0.0016
score: 17.9
NoneNo IPR availableGENE3D3.30.160.60coord: 248..275
e-value: 8.7E-12
score: 44.5
coord: 340..434
e-value: 0.041
score: 13.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 544..566
e-value: 5.1E-5
score: 23.4
coord: 516..538
e-value: 9.0E-6
score: 25.8
coord: 181..204
e-value: 0.0031
score: 17.8
coord: 210..232
e-value: 1.4E-4
score: 22.1
coord: 573..595
e-value: 0.0071
score: 16.7
coord: 267..287
e-value: 0.0037
score: 17.6
NoneNo IPR availableGENE3D2.20.28.30coord: 527..553
e-value: 3.1E-16
score: 58.9
NoneNo IPR availableGENE3D3.30.160.60coord: 463..498
e-value: 1.5E-7
score: 31.2
coord: 499..526
e-value: 6.6E-10
score: 38.7
coord: 136..189
e-value: 0.0019
score: 18.0
coord: 435..462
e-value: 3.3E-7
score: 30.0
coord: 223..247
e-value: 5.2E-15
score: 55.0
NoneNo IPR availableGENE3D2.10.69.10coord: 554..601
e-value: 1.8E-13
score: 50.0
coord: 190..222
e-value: 4.4E-14
score: 51.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..70

Blast
BLAST of TCONS_00052817-protein vs. Swiss-Prot (Human)
Match: ZN184 (Zinc finger protein 184 OS=Homo sapiens GN=ZNF184 PE=1 SV=4)

HSP 1 Score: 142.895 bits (359), Expect = 8.847e-36
Identity = 129/469 (27.51%), Postives = 200/469 (42.64%), Query Frame = 0
Query:  135 HDVRDTREH-GDRIKTYNPVKKQYYQKHHIPNLTKKHHHPEPTPDNPYQCETCDMLFKNLELLSDHQKTVHDNNRQFACRYCGKRFNDKYNMRKHVLIHVGEKRHKCQFCEKAFLRKDHLRSHLQTHYNRK-YGCKLCGKSFKTIELYHRHVKTHKELD--HLSEINNLENLLPELERYDSPKLDRYSPKLDRYDSPKLDRYDSPIPSSRPTHHHYTP--APEITRELI-APPVVKHERMNERLDDSRGEDSPWNRSGSPTYSDISGSSFSQSSPRGMDYGSA-NENTDVLKRVLSYRCGFCNATFEDKESVTIHERKCRAETQKWQCVKCNIVFDEPGTLKQHYEKVHSTEKPVQSPSRWRCKTCDINYPNSKELSRHYASAHKDAQIFPCSECPKTFTVWHNLKKHMLIHLGDKKHKCTVCDKGFVRKDHLNSHMKVHLGDGSKYTCPICMKVFRLKQMYIKHMNLH 595
            H V+  R H G++  T N   K + Q+ H     K H     T + P++C+ CD  F     L+ HQK +H   + + C  CGK FN      +H +IH GEK ++C  C KAF +  +L  H +TH   K Y C  CGKSF       +H+K H        +E     +    L ++   ++       +  +  K   Y S +   + TH         E  +  I +  + KHER++       GE         P      G +FS        YGS+  ++  +      Y+C  C   F     +T H+R      + ++C +C   F    +L QH +K H+ EKP Q      C  C+  +  S  L++H    H   + + C+EC K F+   +L +H   H G+K + C  C K F +  +L  H ++H G+   + C  C K FR +    KH  LH
Sbjct:  320 HLVQHQRIHTGEKPYTCNECGKAFSQRGHFMEHQKIH-----TGEKPFKCDECDKTFTRSTHLTQHQK-IHTGEKTYKCNECGKAFNGPSTFIRHHMIHTGEKPYECNECGKAFSQHSNLTQHQKTHTGEKPYDCAECGKSFSYWSSLAQHLKIHTGEKPYKCNECGKAFSYCSSLTQHR--RIHTREKPFECSECGKAFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIH------TGEK--------PYQCHECGKTFS--------YGSSLIQHRKIHTGERPYKCNECGRAFNQNIHLTQHKR-IHTGAKPYECAECGKAFRHCSSLAQH-QKTHTEEKPYQ------CNKCEKTFSQSSHLTQH-QRIHTGEKPYKCNECDKAFSRSTHLTEHQNTHTGEKPYNCNECRKTFSQSTYLIQHQRIHSGE-KPFGCNDCGKSFRYRSALNKHQRLH 748          

HSP 2 Score: 133.265 bits (334), Expect = 1.650e-32
Identity = 121/463 (26.13%), Postives = 183/463 (39.52%), Query Frame = 0
Query:  164 PNLTKKHHHPEPTPDNPYQCETCDMLFKNLELLSDHQKTVHDNNRQFACRYCGKRFNDKYNMRKHVLIHVGEKRHKCQFCEKAFLRKDHLRSHLQTHYNRK-YGCKLCGKSFKTIELYHRHVKTHKELDHLSEINNLENLLPELERYDSPKLDRYSPK-LDRYDSPKLDRYDSPIPSSRPTHHHYTP--APEITREL-IAPPVVKHERMNERLDDSRGEDSPWNRSGSPTYSDISGSSFSQSSPRGMDYGSANENTDVLKRVLSYRCGFCNATFEDKESVTIHERKCRAETQKWQCVKCNIVFDEPGTLKQHYEKVHSTEKPVQ----------------------SPSRWRCKTCDINYPNSKELSRHYASAHKDAQIFPCSECPKTFTVWHNLKKHMLIHLGDKKHKCTVCDKGFVRKDHLNSHMKVHLGDGSKYTCPICMKVFRLKQMYIKHMNLHGLEQ 599
            P+LT+  H    T + PY+C+ C   F     L  HQ+ +H   + + C  CGK F+ + +  +H  IH GEK  KC  C+K F R  HL  H + H   K Y C  CGK+F     + RH   H   +   E N       +       +      K  D  +  K   Y S +      H    P    E  +       + +H R++ R                P      G +FS  S       + N++     +  +Y C  C   F    S+  HER    E + +QC +C   F    +L QH  K+H+ E+P +                          + C  C   + +   L++H  + H + + + C++C KTF+   +L +H  IH G+K +KC  CDK F R  HL  H   H G+   Y C  C K F      I+H  +H  E+
Sbjct:  291 PSLTQ--HQRIHTGEKPYKCDECGKAFSQRTHLVQHQR-IHTGEKPYTCNECGKAFSQRGHFMEHQKIHTGEKPFKCDECDKTFTRSTHLTQHQKIHTGEKTYKCNECGKAFNGPSTFIRHHMIHTG-EKPYECNECGKAFSQHSNLTQHQKTHTGEKPYDCAECGKSFSYWSSLAQHLKIHTGEKPYKCNECGKAFSYCSSLTQHRRIHTREK--------------PFECSECGKAFSYLS-------NLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTGE-KPYQCHECGKTFSYGSSLIQH-RKIHTGERPYKCNECGRAFNQNIHLTQHKRIHTGAKPYECAECGKAFRHCSSLAQHQKT-HTEEKPYQCNKCEKTFSQSSHLTQHQRIHTGEKPYKCNECDKAFSRSTHLTEHQNTHTGE-KPYNCNECRKTFSQSTYLIQHQRIHSGEK 724          

HSP 3 Score: 130.954 bits (328), Expect = 8.027e-32
Identity = 114/432 (26.39%), Postives = 178/432 (41.20%), Query Frame = 0
Query:  176 TPDNPYQCETCDMLFKNLELLSDHQKTVHDNNRQFACRYCGKRFNDKYNMRKHVLIHVGEKRHKCQFCEKAFLRKDHLRSHLQTHYNRK-YGCKLCGKSFKTIE--LYHRHVKTHKELDHLSEINNLENLLPELERYDSPKLDRYSPKLDRYDSPKLDRYDSPIPSSRPTHHHYTPAPEITREL--IAPPVVKHERMNERLDDSRGEDSPWNRSGSPTYSDISGSSFSQSSPRGMDYGSANENTDVLKRVLSYRCGFCNATFEDKESVTIHERKCRAETQKWQCVKCNIVFDEPGTLKQHYEKVHSTEKPVQSPSRWRCKTCDINYPNSKELSRHYASAHKDAQIFPCSECPKTFTVWHNLKKHMLIHLGDKKHKCTVCDKGFVRKDHLNSHMKVHLGDGSKYTCPICMKVFRLKQMYIKHMNLHGLEQAQQ 602
            T + PY+C  C+  F   E L +HQ+ +H  ++ + C  CGK F +  ++ +H  IH GEK +KC  C KAF ++ HL  H + H   K Y C  CGK+F      + H+ + T ++     E +        L ++        + K +         ++ P    R   HH     E   E         +H  + +      GE         P      G SFS        + S  ++  +      Y+C  C   F    S+T H R+     + ++C +C   F     L QH +K H+ EK       + CK C   +  S  L++H    H   + + C EC KTF+   +L +H  IH G++ +KC  C + F +  HL  H ++H G    Y C  C K FR      +H   H  E+  Q
Sbjct:  245 TGEKPYKCNECEKAFSRSENLINHQR-IHTGDKPYKCDQCGKGFIEGPSLTQHQRIHTGEKPYKCDECGKAFSQRTHLVQHQRIHTGEKPYTCNECGKAFSQRGHFMEHQKIHTGEKPFKCDECDKTFTRSTHLTQHQKIHTGEKTYKCNECGKA----FNGPSTFIR---HHMIHTGEKPYECNECGKAFSQHSNLTQHQKTHTGEK--------PYDCAECGKSFSY-------WSSLAQHLKIHTGEKPYKCNECGKAFSYCSSLTQH-RRIHTREKPFECSECGKAFSYLSNLNQH-QKTHTQEKA------YECKECGKAFIRSSSLAKH-ERIHTGEKPYQCHECGKTFSYGSSLIQHRKIHTGERPYKCNECGRAFNQNIHLTQHKRIHTG-AKPYECAECGKAFRHCSSLAQHQKTHTEEKPYQ 643          
The following BLAST results are available for this feature:
BLAST of TCONS_00052817-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1848.847e-3627.51Zinc finger protein 184 OS=Homo sapiens GN=ZNF184 ... [more]
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