TCONS_00052957-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052957-protein
Unique NameTCONS_00052957-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length275

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052957-protein ID=TCONS_00052957-protein|Name=TCONS_00052957-protein|organism=Clytia hemisphaerica|type=polypeptide|length=275bp
IDKFEFPTKKLSIGEILDSQRIQRKVFGGVSSSTMKNFWLFVTTLCILLL
FTPVVQGEVRISSSTEAPFEGSSVILTCNSSNITTTESWTFYRNNVAIAT
VNQSNYEVKPFESASFSCEVNGTRSVNTVRLDVKELFTIPLLIINQQTIE
SGSPLTLQCNTTNHSNETLMFTFFKDNEQINQSNQSNLMIERISTNQKGI
YMCNVTIGSIVKTSNKVNVEVILPVSIQTEQTFEGFNTTLICNTPNHETN
LSYKWFANNNQQSSTEKTLVLPKVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033442XLOC_033442Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052957TCONS_00052957Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR007110Ig-like_dom
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 63..134
e-value: 17.0
score: 9.4
coord: 144..222
e-value: 1.2E-5
score: 34.8
IPR007110Immunoglobulin-like domainPFAMPF13895Ig_2coord: 145..221
e-value: 2.3E-10
score: 40.6
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 224..275
score: 7.05
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 140..220
score: 9.9
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 53..130
score: 7.522
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 141..222
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 58..123
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 196..272
e-value: 1.3E-8
score: 34.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 140..195
e-value: 1.2E-9
score: 37.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 109..135
e-value: 0.4
score: 10.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 53..108
e-value: 1.7E-4
score: 21.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052957-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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