TCONS_00052960-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052960-protein
Unique NameTCONS_00052960-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052960-protein ID=TCONS_00052960-protein|Name=TCONS_00052960-protein|organism=Clytia hemisphaerica|type=polypeptide|length=135bp
MATKKEAAPVNYVHQTAINLETIKKEQKNQKIYTNYSINPFKKMYTLSGK
PNSLHDSADGEEDDDFLQVIKRANQTPVEKFEFPQTEAQEIGWCTKPLIV
QPKDDARLHHPKKHSEITKFMDAYWRQKEQSENLN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033445XLOC_033445Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052960TCONS_00052960Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029214FAM183
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029214FAM183 familyPFAMPF14886FAM183coord: 19..120
e-value: 5.8E-33
score: 113.8

Blast
[Close]
BLAST of TCONS_00052960-protein vs. Swiss-Prot (Human)
Match: F183A (Protein FAM183A OS=Homo sapiens GN=FAM183A PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.350e-24
Identity = 49/121 (40.50%), Postives = 70/121 (57.85%), Query Frame = 0 
Query:    5 KEAAPVNYVHQTAINLETIKKEQKNQKIYTNYSINPFKKMYTLSGKPNSLHDSADGEEDDDFLQVIKRANQTPVEKFEFPQTEAQEIGWCTKPLIVQPKDDARLHHPKKHSEITKFMDAYW 125
            KE    + VHQ  I  E   KE + QK+YT Y +NP +K++T++ KP S HD+ +   D  FL +I  A Q P +K+   QTE QE+GW  +PLI   + D RL+H +  S+IT +    W
Sbjct:    6 KEKVIPDEVHQNQILRELYLKELRTQKLYTQYHVNPLRKIHTVTRKPMSWHDNLEEPADARFLNLIHHAAQGPRKKYPETQTENQEVGWDLEPLINPERHDRRLNHFRVCSDITLYKAKTW 126
The following BLAST results are available for this feature:
BLAST of TCONS_00052960-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F183A8.350e-2440.50Protein FAM183A OS=Homo sapiens GN=FAM183A PE=3 SV... [more]
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