TCONS_00052963-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052963-protein
Unique NameTCONS_00052963-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1180

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052963-protein ID=TCONS_00052963-protein|Name=TCONS_00052963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1180bp
MAIVVKLLLMVLLVRNCEGSVNELFYPFGDQWNDTTLVGASFYNTFYSVM
QLHVPFRSSNRLFIYDSGYVSTDLQTKENPTVNHGIFLYSGFFSSKVGSV
SHRQTRNEPVVNKMIEDDLRRYKDHKEPNMKDFVPKNTIIITYYQTYRYL
STQRNVFQAILTYNDQDAYLITNYYVLENAGATVAQTYDDCTHTFAPRFN
SNNLQYNTNIGVQGRYVWNLNDVDCEAEKKRYITEDLDGVQILPKGDDVV
EKITLSQPMPLFHGLKSEFLLSSDGYLTTGSDNTTLNTHHIKYMWYDYLA
FFANDFNITDESRGTILYYETTTNQELLNRTAADITFFTWRDFKPLHAFV
VSYVNCTDKKDRVINFDAIIVTDGYDTYFIFKYFNENFISDVWSFYSSKQ
CNWDIMGVVGTRWTNTGGAGLSVFKVYDHACMTQVFLPYGSHIDTVKTVA
DETNFHVYLTKSMPLFTKLGKTLYVNSNGKISYTRDSRNVKSTFLANSIS
IAPFYLDLYTGGIGRIFYRETFDTKILKRLTDAVNVTGFTCNHAFIATYE
NMAEYGVHTSRNSFQIALATDGHVTYGVLYYYRVDSYERAAAGYGEAQCN
TGHLIVPYSQGELELYGYEINPRVFKLTKEQCKDEIDAYLYPFGKEHGDQ
VLLYNSTTSTVPFKVQNILNLFGTEVNKLYISKYGFLSLDEQPVDEIVWY
PYNKTKIIYGYLTNLPSNVYYRETNDTDILEKYLSEKNILTTIDSVVVIT
FHTDKRGDIPGYHLHTNNFQIVLGSRYRDSAYVGFIYRRLDTLFGVVGFS
VPGCFSYEFTKPLETHYLPSQKGGKQGFFGSWRCYDFETAMLPNGVPSGD
QFYGYLNDELHLGSHDKYLTIRKGNMPGFDGIRIGYIVISANGMLTMNRD
PKPTSSKYYNSNNIILGYVQPNWVNFNNKDATFVREIARNSMRNVHDRIT
LDMLNNAVNKYKTLRQENSVTQPFNGNHAVVITFNTINGVHYQYGLISNG
SETHVVMNFLSVGGYGFHGVSNPACTKYSMTSYISSFQEATTFLLDGSNT
GVKGQYVYPITHRICEELRPKPPPPPMTPTTTTATIPFTAPLLPKSTESL
FSTTTSHTTVITKDSSKESQAGGPEPSEKTSPVTNDQGDSSSNQMPIIIG
AVVGGSALLVLVTAVVVVLKRRSARMQGYS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033446XLOC_033446Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052963TCONS_00052963Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003886NIDO_dom
Vocabulary: Biological Process
TermDefinition
GO:0007160cell-matrix adhesion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007160 cell-matrix adhesion
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003886NIDO domainSMARTSM00539ylk_9coord: 503..625
e-value: 8.0E-5
score: 23.7
NoneNo IPR availableGENE3D1.20.5.100coord: 1136..1177
e-value: 6.2E-8
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1103..1141

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052963-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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