TCONS_00053061-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053061-protein
Unique NameTCONS_00053061-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length265

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053061-protein ID=TCONS_00053061-protein|Name=TCONS_00053061-protein|organism=Clytia hemisphaerica|type=polypeptide|length=265bp
MIAEKTKTIDPLEPFLLLGKNVRGAAASQLVQQVTEAPNVFVFGELLQLD
GIKELENNETHSQYWRLLQLYAFGVYKEFQEKKESLPELNDAQIRKLRLL
TLATLASKSKFVYYDSLKSSLGLDNLRQLEDLIIEAIYADILQGKINQKE
KRLEVDFVVGRDIKPEMIETIIDTLQNWSAKCEAAMVNLDVQSSRANVNK
ESKAQHRKDIENNIESMKKIHRAQDMQQVLEPESSGSPVARNQKMKASSK
TIMKSAVKPSTSRTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033515XLOC_033515Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053061TCONS_00053061Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 265..265
NoneNo IPR availableSMARTSM00753PINTcoord: 88..178
e-value: 3.2E-18
score: 76.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..265
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 88..178
e-value: 3.2E-18
score: 76.5
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 71..155
e-value: 1.8E-6
score: 28.3

Blast
[Close]
BLAST of TCONS_00053061-protein vs. Swiss-Prot (Human)
Match: CSN7B (COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.072e-61
Identity = 106/257 (41.25%), Postives = 158/257 (61.48%), Query Frame = 0 
Query:    1 MIAEKTKTIDPLEPFLLLGKNVRGAAASQLVQQVTEAPNVFVFGELLQLDGIKELENNETHSQYWRLLQLYAFGVYKEFQEKKESLPELNDAQIRKLRLLTLATLASKSKFVYYDSLKSSLGLDNLRQLEDLIIEAIYADILQGKINQKEKRLEVDFVVGRDIKPEMIETIIDTLQNWSAKCEAAMVNLDVQSSRANVNKESKAQHRKDIENNIESMKKIHR------AQDMQQVLEPESSGSPVARNQKMKASSKT 251
            M  E+  + + LE F+LL K   G+A + L+ QV EAP V+VFGELL+L  ++EL     ++ Y +LL L+A+G Y ++   KESLPEL+ AQ  KL+ LT+ +LAS+ K + Y  L   L + NLR+LEDLIIEA+Y DI+QGK++Q+ + LEVDF +GRDI+ + I  I+ TL  W   CEA ++ ++ Q  RAN  KE+  + ++ +E  + ++KK  +      AQ+M+Q L          + Q  K  SK 
Sbjct:    1 MAGEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEG-ANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSSAQEMEQQLAERECPPHAEQRQPTKKMSKV 256
The following BLAST results are available for this feature:
BLAST of TCONS_00053061-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CSN7B1.072e-6141.25COP9 signalosome complex subunit 7b OS=Homo sapien... [more]
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