TCONS_00053835-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053835-protein
Unique NameTCONS_00053835-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length267

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053835-protein ID=TCONS_00053835-protein|Name=TCONS_00053835-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
MFASLRLVNNKLQTICQCQKLQQRTMSYLKAHRKRFYRNVNLEKTDEGFL
VQLDGKTIKTPLRFKLCIPQYDLALAVSNEWHMQTNEINPFSMPLTSICN
TTIDNPTELPKEDLVKELLQFLHSDTICSLAEMPESLVERQDKEWKPIRD
WFSKTFEVEVNASSNLFNLCQSDETVERLEEYLLKMNYWQINGLQSGIDA
IKSFILPLAVFHGHISVERAVYLSRLESEYQSEKWGKFEGSHDIDQYTQQ
AMLAAGTLVCNLCRFDI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033971XLOC_033971Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053835TCONS_00053835Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011419ATP12_ATP_synth-F1-assembly
IPR023335ATPase_assmbl_ATP12_dom
Vocabulary: Biological Process
TermDefinition
GO:0043461proton-transporting ATP synthase complex assembly
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043461 proton-transporting ATP synthase complex assembly
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011419ATP12, ATP synthase F1-assembly proteinPFAMPF07542ATP12coord: 34..152
e-value: 2.5E-34
score: 118.0
IPR023335Orthogonal Bundle domain in ATP12GENE3D1.10.3580.10coord: 93..263
e-value: 1.3E-49
score: 167.7
NoneNo IPR availableGENE3D3.30.2180.10coord: 6..90
e-value: 5.8E-19
score: 67.6
NoneNo IPR availableSUPERFAMILY160909ATP12-likecoord: 7..261

Blast
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BLAST of TCONS_00053835-protein vs. Swiss-Prot (Human)
Match: ATPF2 (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens GN=ATPAF2 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.905e-59
Identity = 94/231 (40.69%), Postives = 144/231 (62.34%), Query Frame = 0 
Query:   33 RKRFYRNVNLEKTDEGFLVQLDGKTIKTPLRFKLCIPQYDLALAVSNEWHMQTNEINPFSMPLTSICNTTIDNPTELPKEDLVKELLQFLHSDTICSLAEMPESLVERQDKEWKPIRDWFSKTFEVEVNASSNLFNLCQSDETVERLEEYLLKMNYWQINGLQSGIDAIKSFILPLAVFHGHISVERAVYLSRLESEYQSEKWGKFEGSHDIDQYTQQAMLAAGTLVCNLC 263
            RKRFY+NV++ + + GF + LD + +KTP      +P   LA+AV+ EW  Q + I  ++M LT++CNT++DNPT+  K+ L++  ++FL +DTIC   E PE+LVE Q  EW PI +W  K + VE+++S+++       +T E L  +L   N W + G++     +KS +L L +    ++VE+AV LSRLE EYQ +KWG  E +HD +    +A  AAGTL  +LC
Sbjct:   46 RKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHLC 276
The following BLAST results are available for this feature:
BLAST of TCONS_00053835-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATPF21.905e-5940.69ATP synthase mitochondrial F1 complex assembly fac... [more]
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