TCONS_00054083-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054083-protein
Unique NameTCONS_00054083-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length141

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054083-protein ID=TCONS_00054083-protein|Name=TCONS_00054083-protein|organism=Clytia hemisphaerica|type=polypeptide|length=141bp
ILENIDLKIDKGKLIAVIGQVGCGKSSLLSSILGEIEKLSGNVITRGRIA
YVPQQAWIQNQSLRENILFGKQYRNENYKEILRACALETDIELLPASDLT
EIGEKGINLSGGQKQRVSLARAVYENADIYLFDDPLSAVDA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034133XLOC_034133Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054083TCONS_00054083Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..141
e-value: 2.6E-44
score: 151.3
NoneNo IPR availableCDDcd03250ABCC_MRP_domain1coord: 1..141
e-value: 2.21357E-91
score: 265.102
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 2..136
e-value: 1.6E-24
score: 86.8
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 109..123
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..141

Blast
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BLAST of TCONS_00054083-protein vs. Swiss-Prot (Human)
Match: MRP1 (Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 8.067e-63
Identity = 96/140 (68.57%), Postives = 115/140 (82.14%), Query Frame = 0 
Query:    2 LENIDLKIDKGKLIAVIGQVGCGKSSLLSSILGEIEKLSGNVITRGRIAYVPQQAWIQNQSLRENILFGKQYRNENYKEILRACALETDIELLPASDLTEIGEKGINLSGGQKQRVSLARAVYENADIYLFDDPLSAVDA 141
            L  I   I +G L+AV+GQVGCGKSSLLS++L E++K+ G+V  +G +AYVPQQAWIQN SLRENILFG Q     Y+ +++ACAL  D+E+LP+ D TEIGEKG+NLSGGQKQRVSLARAVY NADIYLFDDPLSAVDA
Sbjct:  661 LNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKGSVAYVPQQAWIQNDSLRENILFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDA 800
The following BLAST results are available for this feature:
BLAST of TCONS_00054083-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRP18.067e-6368.57Multidrug resistance-associated protein 1 OS=Homo ... [more]
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