TCONS_00054243-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054243-protein
Unique NameTCONS_00054243-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length152

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054243-protein ID=TCONS_00054243-protein|Name=TCONS_00054243-protein|organism=Clytia hemisphaerica|type=polypeptide|length=152bp
MDYNLFSKWSATLLLCSLLSSLEKTESHGSHQQGQHNRMDSRHVHDVEHI
NEHLRDQIDVNQQKPMSNEDLQFHYFKVHDSDNDDKLDGIELATAMAHYH
DEEHAEKPEDYTEEELASMVDQILDEDDLNKDGYIDYPEFIASQQREEAV
AK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034216XLOC_034216Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054243TCONS_00054243Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 70..142
e-value: 6.0E-8
score: 33.0
NoneNo IPR availableGENE3D1.10.238.10coord: 48..150
e-value: 2.9E-12
score: 45.7
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 128..140
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 80..92
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 66..142

Blast
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BLAST of TCONS_00054243-protein vs. Swiss-Prot (Human)
Match: MCFD2 (Multiple coagulation factor deficiency protein 2 OS=Homo sapiens GN=MCFD2 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.135e-29
Identity = 60/139 (43.17%), Postives = 82/139 (58.99%), Query Frame = 0 
Query:   12 TLLLCSLLSSL-----EKTESHGSHQQGQHNRMDSRHVHDVEHINEHLRDQIDVNQQKPMSNEDLQFHYFKVHDSDNDDKLDGIELATAMAHYHDEEHAEKPEDYTEEELASMVDQILDEDDLNKDGYIDYPEFIASQQ 145
            T  LC LL +         E   S  Q     +D   VHD EHI EHL   I+  + + MS ++LQ HYFK+HD D ++ LDG+EL+TA+ H H EE +E+    +E+EL +++D +L +DD N DGYIDY EF  S Q
Sbjct:    9 TPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAE-MSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 146
The following BLAST results are available for this feature:
BLAST of TCONS_00054243-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCFD21.135e-2943.17Multiple coagulation factor deficiency protein 2 O... [more]
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