TCONS_00054248-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054248-protein
Unique NameTCONS_00054248-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length354

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054248-protein ID=TCONS_00054248-protein|Name=TCONS_00054248-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
SVCIDSYTDCSWVKSNGYCNPSSQFYSWAKQNCIKTCGIQCTPPACVDRD
ATYCASKATNCNAGRGWNYYLRYYCPKTCKTCNGGGNGGSGGGSGGGATK
CGIKGSGHTRIVGGTNARPGDWPWQVQIDRTTDHMRVWCGGTVINDEWIV
SAAHCFERDTRASSYAIYLGEHDLQSGSQHEQKLEIAEIIMHPKYQSRTY
EKDIALIRLKKKALFNTHVRPACFPDSSVKFYDGEACYVTGWGYLREGGS
SPRILQQVKVPLVPRSTCRQSYGQNSITGNMICAGYPQGGKDACQGDSGG
PLVCKKRNSSGQDVWYLWGVVSWGRGCASPRLYGVYSNMETLGSWATQTM
RSRS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034221XLOC_034221Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054248TCONS_00054248Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR003582ShKT_dom
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 140..155
score: 49.83
coord: 199..213
score: 38.74
coord: 291..303
score: 74.48
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 45..83
e-value: 1.0
score: 18.4
coord: 2..42
e-value: 2.8
score: 16.3
IPR003582ShKT domainPFAMPF01549ShKcoord: 46..82
e-value: 0.0013
score: 19.1
coord: 3..39
e-value: 4.1E-5
score: 23.9
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 3..41
score: 9.957
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 46..82
score: 7.653
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 110..346
e-value: 6.3E-90
score: 314.7
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 111..345
e-value: 2.5E-75
score: 253.0
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 111..351
score: 39.338
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 111..338
e-value: 1.43E-101
score: 301.118
NoneNo IPR availableGENE3D2.40.10.10coord: 110..121
e-value: 3.5E-7
score: 29.3
NoneNo IPR availableGENE3D2.40.10.10coord: 217..338
e-value: 1.7E-49
score: 166.8
NoneNo IPR availableGENE3D2.40.10.10coord: 122..143
e-value: 2.4E-17
score: 62.3
NoneNo IPR availableGENE3D2.40.10.10coord: 144..216
e-value: 2.1E-30
score: 104.1
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 150..155
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 292..303
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 100..351

Blast
[Close]
BLAST of TCONS_00054248-protein vs. Swiss-Prot (Human)
Match: PRSS8 (Prostasin OS=Homo sapiens GN=PRSS8 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.681e-62
Identity = 105/265 (39.62%), Postives = 155/265 (58.49%), Query Frame = 0 
Query:   90 SGGGSGGGATKCGIKGSGHTRIVGGTNARPGDWPWQVQIDRTTDHMRVWCGGTVINDEWIVSAAHCFERDTRASSYAIYLGEHDLQSGSQHEQKLEIAEIIMHPKYQSRTYEKDIALIRLKKKALFNTHVRPACFPDSSVKFYDGEACYVTGWGYLREGGS--SPRILQQVKVPLVPRSTCRQSYGQNS-------ITGNMICAGYPQGGKDACQGDSGGPLVCKKRNSSGQDVWYLWGVVSWGRGCASPRLYGVYSNMETLGSW 345
            SG G+ G    CG+  +   RI GG++A  G WPWQV I     H+   CGG++++++W++SAAHCF  +    +Y + LG H L S S+  +   + +II HP Y     + DIAL++L +   F+ ++RP C P ++  F +G  C VTGWG++    S  +P+ LQQ++VPL+ R TC   Y  ++       +  +M+CAGY +GGKDACQGDSGGPL C       + +WYL G+VSWG  C +    GVY+   +  SW
Sbjct:   26 SGTGAEGAEAPCGV--APQARITGGSSAVAGQWPWQVSITYEGVHV---CGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPICLPAANASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNCLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPV-----EGLWYLTGIVSWGDACGARNRPGVYTLASSYASW 280
The following BLAST results are available for this feature:
BLAST of TCONS_00054248-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRSS81.681e-6239.62Prostasin OS=Homo sapiens GN=PRSS8 PE=1 SV=1[more]
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