TCONS_00054259-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054259-protein
Unique NameTCONS_00054259-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length321

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054259-protein ID=TCONS_00054259-protein|Name=TCONS_00054259-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
MKFAVVVSLLTVLACVCNARKLKIVTVATDETDGYLRFQRSAKLYGLDVE
VFGMHEEWLGGDMANGPGGGHKINLLRRHLRKYENEEDLIMMFTDSYDVV
FTEGPEEILKKYDSFNATILFSSEDFCWPDKSLAKDYPAPDVENGYRFLC
SGGIIGPANKLFEVISMEVIENTSDDQLYYTKIFLEKRDKYNMKLDSSSV
LFQNLNGNKDHVELNFDLKNARVTNSRYNTFPSVIHGNGPSKLYLDHLGN
YIANSWSFSESCISCKEDTFLLSDIKEEDWPTILIGLFIPEPTPFVQSYL
RHISSQRYPKSKIDIFLHSVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034226XLOC_034226Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054259TCONS_00054259Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..15
score: 5.0

Blast
[Close]
BLAST of TCONS_00054259-protein vs. Swiss-Prot (Human)
Match: PLOD3 (Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens GN=PLOD3 PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 9.403e-86
Identity = 130/304 (42.76%), Postives = 191/304 (62.83%), Query Frame = 0 
Query:   18 NARKLKIVTVATDETDGYLRFQRSAKLYGLDVEVFGMHEEWLGGDMANGPGGGHKINLLRRHLRKYENEEDLIMMFTDSYDVVFTEGPEEILKKYDSFNATILFSSEDFCWPDKSLAKDYPAPDVENGYRFLCSGGIIGPANKLFEVISMEVIENTSDDQLYYTKIFLEK--RDKYNMKLDSSSVLFQNLNGNKDHVELNFDLKNARVTNSRYNTFPSVIHGNGPSKLYLDHLGNYIANSWSFSESCISCKEDTFLLSDIKEEDWPTILIGLFIPEPTPFVQSYLRHISSQRYPKSKIDIFLHS 319
            N  KL ++TVAT ET+GYLRF RSA+ +   V   G+ EEW GGD+A   GGG K+  L++ + KY + ED+I+MF DSYDV+    P E+LKK+    + +LFS+E FCWP+  LA+ Y  P+V  G RFL SGG IG A  + +++     ++  DDQL+YT+++L+   R+K ++ LD  S +FQNLNG  D V L FD    R+ N  Y+T P V+HGNGP+KL L++LGNY+ N W+    C  C +D   L   +    P + + +F+ +PTPF+  +L+ +    YP  ++ +FLH+
Sbjct:   35 NPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVARTVGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESFCWPEWGLAEQY--PEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPGLREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKLQLNYLGNYVPNGWTPEGGCGFCNQDRRTLPGGQPP--PRVFLAVFVEQPTPFLPRFLQRLLLLDYPPDRVTLFLHN 334
The following BLAST results are available for this feature:
BLAST of TCONS_00054259-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLOD39.403e-8642.76Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ... [more]
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