TCONS_00054318-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00054318-protein
Unique Name	TCONS_00054318-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	229

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00054318-protein ID=TCONS_00054318-protein|Name=TCONS_00054318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
MPIMRASAAVQSGGPPPTRRNNSNVENRKSTFTPENRKSRSSLSNTNLTS
SQNSNINNGNNKQNIASYGSQTQFKASFTISRDKDDTPACFKQDGERFTN
EQTLKLYSAADYTVKMEIAPNMELLYIKFGGVETPFKSTNDPEKDQKSIY
QFLWSTKGIDPTENRHRTDVLCSMKFKNFKEIEFRLQVKFYTLQKMKHAT
WGEKLNSISMDCTAGRGTYQSFVEKMKYI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034252	XLOC_034252	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00054318	TCONS_00054318	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029204	CNRIP1

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029204	CB1 cannabinoid receptor-interacting protein 1	PFAM	PF15043	CNRIP1	coord: 71..218 e-value: 2.9E-36 score: 124.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65

Blast

[Close]

BLAST of TCONS_00054318-protein vs. Swiss-Prot (Human)
Match: CNRP1 (CB1 cannabinoid receptor-interacting protein 1 OS=Homo sapiens GN=CNRIP1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.316e-19
Identity = 42/140 (30.00%), Postives = 74/140 (52.86%), Query Frame = 0

Query:   75 KASFTISRDKDDTPACFKQDGERFTNEQTLKLYSAADYTVKMEIAPN-MELLYIKFGGVETPFK-STNDPEKDQKSIYQFLWSTKGIDPTENRHRTDVLCSMKFKNFKEIEFRLQVKFYTLQKMKHATWGEKLNSISMDC 212
            + S  +    +D P  +K DG+RF   +T+KL + + Y V+++I P+ +++  I  GGV  P +  + +P+ D + +Y   + T+G+ PT++  R  +  +M F +    E   QVKFY   K  H  WG   + I  +C
Sbjct:    9 RLSIALRIQPNDGPVFYKVDGQRFGQNRTIKLLTGSSYKVEVKIKPSTLQVENISIGGVLVPLELKSKEPDGD-RVVYTGTYDTEGVTPTKSGERQPIQITMPFTDIGTFETVWQVKFYNYHKRDHCQWGSPFSVIEYEC 147

The following BLAST results are available for this feature:

BLAST of TCONS_00054318-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00054318-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CNRP1	1.316e-19	30.00	CB1 cannabinoid receptor-interacting protein 1 OS=...	[more]

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TCONS_00054318-protein (polypeptide) - C. hemisphaerica