TCONS_00054324-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054324-protein
Unique NameTCONS_00054324-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length609

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054324-protein ID=TCONS_00054324-protein|Name=TCONS_00054324-protein|organism=Clytia hemisphaerica|type=polypeptide|length=609bp
MFRINLWKLLMVLSHVHFVTVYGELYYDQMAFDCSSNNMTLHIPKNQTSN
IESTILVTLRDTRCVASVNQTHFTLTTQLDECGTIIGHDNETIFYENIAV
IRPRKISNSVIIRLDDIEKTVELKCLFQRTVTVKSSVLVLEGDGYSQWSN
FSSCSKNCGLGVRNRTRTCLFDVPERCSNTITENIDCLIKECPKTCKEVK
CDAKKFQKCYENYNVTENARCDCLPAYVSINGSCVTAPRIVEVVAFKLNL
TYKSEYNDTNNPKTKELTGSLERDLHKTLGLSSDEYVKILALSRGSVFVD
FIVLLKNDSVENKTSVYEKLNSEVKTNRTGSLVDYFPVAEQIVVVVGSDL
CALDSDSCDRVSSTCVPTPGQGLNFRCQCKVGYIQIDDVTCELITTTTTT
TTTTTTTPTTSKATSSTTTTTTEPDLNGTTTTTTTTTTTKLTSSTTTTTE
TLDPNERTSTTTTSPLSTTTTASTSTKITGTTSTTLAPPKTTTSTGGRTT
ASDKLTIVLVSVAVALFVFFCCIFLIIFFRKRRSAQYYANDESGDTANQA
YDTDSVLNESNFNQIAFTEGKRMRAHSLHQPQGVEATKYRDVPSPSYHDM
AMSSSYHFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034255XLOC_034255Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054324TCONS_00054324Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR000082SEA_dom
IPR013032EGF-like_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 145..193
e-value: 3.6E-9
score: 46.5
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 141..193
e-value: 2.9E-9
score: 36.7
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 143..193
score: 10.043
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 143..192
IPR000082SEA domainPFAMPF01390SEAcoord: 246..334
e-value: 3.9E-7
score: 30.2
IPR000082SEA domainGENE3D3.30.70.960coord: 244..333
e-value: 5.2E-7
score: 29.3
IPR000082SEA domainPROSITEPS50024SEAcoord: 235..349
score: 9.52
NoneNo IPR availableGENE3D2.10.25.10coord: 345..397
e-value: 1.2E-5
score: 25.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..499
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 377..391

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054324-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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