TCONS_00054396-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054396-protein
Unique NameTCONS_00054396-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054396-protein ID=TCONS_00054396-protein|Name=TCONS_00054396-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp
MVDVGGQRSERRKWIHCFENVTSIMFLVALSEFDQLLFESENENRMEESK
ALFKTIITYPWFQQSSIILFLNKTDLLEEKIMKSNLADYFPEFDGPKLDA
KAAREFILKMFVDLNPDTEKIIYSHFTCATDTENIRFVFAAVKDTILQLN
LKEYNLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034293XLOC_034293Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054396TCONS_00054396Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001019Gprotein_alpha_su
IPR000654Gprotein_alpha_Q
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0004871signal transducer activity
GO:0031683G-protein beta/gamma-subunit complex binding
GO:0019001guanyl nucleotide binding
GO:0005525GTP binding
GO:0001664G-protein coupled receptor binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
molecular_function GO:0031683 G-protein beta/gamma-subunit complex binding
molecular_function GO:0001664 G-protein coupled receptor binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0019001 guanyl nucleotide binding
molecular_function GO:0004871 signal transducer activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitPRINTSPR00318GPROTEINAcoord: 21..49
score: 57.71
coord: 67..76
score: 80.66
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitSMARTSM00275galpha_1coord: 1..156
e-value: 6.3E-23
score: 92.2
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitPFAMPF00503G-alphacoord: 1..146
e-value: 7.4E-59
score: 199.6
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitCDDcd00066G-alphacoord: 1..151
e-value: 1.04589E-100
score: 293.664
IPR000654G-protein alpha subunit, group QPRINTSPR00442GPROTEINAQcoord: 109..120
score: 74.62
coord: 57..67
score: 79.34
coord: 95..105
score: 68.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1..157
e-value: 7.4E-39
score: 133.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..151

Blast
[Close]
BLAST of TCONS_00054396-protein vs. Swiss-Prot (Human)
Match: GNAQ (Guanine nucleotide-binding protein G(q) subunit alpha OS=Homo sapiens GN=GNAQ PE=1 SV=4)

HSP 1 Score: 300.056 bits (767), Expect = 2.364e-103
Identity = 140/157 (89.17%), Postives = 151/157 (96.18%), Query Frame = 0 
Query:    1 MVDVGGQRSERRKWIHCFENVTSIMFLVALSEFDQLLFESENENRMEESKALFKTIITYPWFQQSSIILFLNKTDLLEEKIMKSNLADYFPEFDGPKLDAKAAREFILKMFVDLNPDTEKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV 157
            MVDVGGQRSERRKWIHCFENVTSIMFLVALSE+DQ+L ES+NENRMEESKALF+TIITYPWFQ SS+ILFLNK DLLEEKIM S+L DYFPE+DGP+ DA+AAREFILKMFVDLNPD++KIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV
Sbjct:  203 MVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV 359
The following BLAST results are available for this feature:
BLAST of TCONS_00054396-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNAQ2.364e-10389.17Guanine nucleotide-binding protein G(q) subunit al... [more]
back to top