TCONS_00054716-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054716-protein
Unique NameTCONS_00054716-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1753

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054716-protein ID=TCONS_00054716-protein|Name=TCONS_00054716-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1753bp
MEMKKAKLDLYPSESEMSPRSFKNHAAYWAQLFNGDPKINKHFECPSQIQ
IRDTKLEKEIFEYLSNVVPSLLTENDVGGVLRYVTNTEKFEKLIAQELEY
FLCNSYNTKETLEEFSNPTKFCGKVFELGDPTYTCKDCAADPTCVFCHDC
FFNSEHQHHKYRLHASSGTGGYCDCGDDEAWSTNPACNKHKEGLDVDEAA
DPTEKLPEDLKRRSIFLIHFLIQYCVDLICWEETDELPHPLVASESGKEN
FIVMLFNDESHTYDEVIETLTKTVPGCGNNQALHFATIVDKMGRSAIVKG
KKEICTEKVALCRELTSRNNKDPLKCEALIRDLVAHQCVAQSLMNWLLNT
VNMSDGLRRILTVLSTKHLYGRQSSILEQVISVDVQLWKAARHDTHQLFM
NGILMDMYGRQQFAITFCKNYSQIMSEFIKDDHEHSISVASLSVQIYTVP
TIAHMLLEEQGVLQKCFSAFWNELKPAMNSDHGWLDFQPSQVIKVKRADF
ILRDIGYLLRNKPKWSDKIKTEFLLAFDKIVQLLKAMQGMDSCERYTKSH
VTYEPNWESGFNLQVYLVPIIEMLLHWTCTNFEVYKVVMFKCVTELMKIY
PKLDFKVVNNSLICDYDVSKKLVSVHSPLSRFIAGLIPAAVKFSDINNLK
ELLQIYDGLPEKDRLKTQVTLIEAPLRTLVLMGQEYAQMWKRNGYAIHHQ
IFYYHNVKFGTEMFDRDVLLVQIMGSLMSPNHFLDVILQKYKLHDFFSSS
MTGEKVEGETIDKTRILAHECFHLLYFILVERYVVNLSEISARDILRREV
CHRLALGPATRSSLVKNLPFKDHEDDSSVDERLDDVLRDVSEYKSPGLDG
KGTYQLRDDLMKTTSQYFLHYTRNERAKFVEQKKKHAKLFPNMKEYELTD
LPEWNPLFQNILRVFECDRMDYILRCVLKNPDHFGSEETVELALFIVGTG
LIEAKRHPSKLPNFLPMLSKPIEEGKNIKNLLEEMLKSGKHSDSGIFKWV
IELLRQAHPDEDNLTMELDQDNNKEAEETERLLRKKRAQEQRAKMMAKMN
NMQKAFMQSHQGFFSEGMDVGDETDGASIISPSTFPVVLGSKCTVTDSSI
GSDPVQCILCQEEQSIDNDEKMFLMTCFQQKSSVFNKSGTKPNSRDVSQI
TAELNGVTMTHVSSCGHILHSECWNKFYTTIKERYRSLARTRSIDVLQSE
YLCPLCNSLCNTVLPILPRLEEEKSEDSLELSLSEFLSYVDKFSSELSTL
PKKKVEKEDRKTKSRSFISMGVRMLQSYIRVAELEQNENVMDMFPKKLMQ
LDAFDENSGQAIPLSWMVFSFTLQTLECIHREGGTNMFEEILERDWMFFY
AFVQYLSSTAMATVYEPIQEYGTEVFNFFCDENNDFTLNSVDVFGLMVSL
RCLMSTCGHIFQEKQPNFMKIKQNQMNDVIFKVCFVAQYVKALLQTPGLH
EDDQMQEGENESGQDDENVEYLVKAWKYVQSMIGPDNQVVNGHVLKERVT
SSLLPFLRCSAIFFHLLVGVSMPEDLKLKTMTDSLEMSSLLRYMNLPTNL
SEALSFDKLFNDPTIKLMVDRWCSDIRREQLKLVRPIKDCYLSSRRLVDL
PEQYSTLIKRASGFKCPTVGDTSRSPALCLICGEMICSQCYCCVNEKGMP
NQSFGASAVHIQQCGQGVGAFLKIRDCEIYLLYNQRKGVFIAAPYLDSYG
EPDRGFHRGNPLFLDKGRYERIQNYWLKHKIPTTIVQAMEKNRNLLAFDW
NMI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034473XLOC_034473Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054716TCONS_00054716Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR013083Znf_RING/FYVE/PHD
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030163 protein catabolic process
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1022..1055
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 120..191
e-value: 2.5E-22
score: 90.2
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 122..190
e-value: 8.0E-18
score: 64.3
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 120..192
score: 10.145
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 249..327
e-value: 1.0E-16
score: 60.4
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 242..329
e-value: 3.7E-17
score: 61.4
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 249..320
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1006..1233
e-value: 8.7E-6
score: 24.8
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 796..882

Blast
BLAST of TCONS_00054716-protein vs. Swiss-Prot (Human)
Match: UBR2 (E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens GN=UBR2 PE=1 SV=1)

HSP 1 Score: 839.336 bits (2167), Expect = 0.000e+0
Identity = 556/1786 (31.13%), Postives = 950/1786 (53.19%), Query Frame = 0
Query:   51 IRDTKLEKEIFEYLSNVVPSLLTENDVGGVLRYVTNTEKF---EKLIAQE-----LEYFLCNSYNTK--ETLEEFSNPTKFCGKVFELGDPTYTCKDCAADPTCVFCHDCFFNSEHQHHKYRLHASSGTGGYCDCGDDEAWSTNPACNKHK-EGLDVDEAADPTEKLPEDLKRRSIFLIHFLIQYCVDLICWEETDELPHPLVASESGKENFIVMLFNDESHTYDEVIETLTKTVPGCGNNQALHFATIVDKMGRSAIVKGKKEICTEKVALCRELTSRNNKDPLKCEALIRDLVAHQCVAQSLMNWLLNTVNMSDGLRRILTVLSTKHLY-GRQSSILEQVISVDVQLWKAARHDTHQLFMNGILMDMYGRQQFAITFCKNYSQIMSEFIKDDHEHSISVASLSVQIYTVPTIAHMLLEEQGVLQKCFSAFWNELKPAMNSDHGWLDFQ---PSQVIKVKRADFILRDIGYLLRNKP-KWSDKIKTEFLLAFDKIVQLLKAMQGMDSCERYTKSHVTYEPNWESGFNLQVYLVPIIEMLLHWTCTNFEVYKVVMFKCVTELMKIY-------PKLDFKVVNNSL-ICDYDVSKKLVSVHSPLSRFIAGLIPAAVKFSDINNLKELLQIYDGLPEKDRLKTQVTLIEAPLRTLVLMGQEYAQMWKRNGYAIHHQIFYYHNVKFGTEMFDRDVLLVQIMGSLMSPNHFLDVILQKYKLHDFFSSSMTGEKVEGE-----TIDKTRILAHECFHLLYFILVERYVVNLSEISARDILRREVCHRLALGPATRSSLVKNLPFKDHEDDSSVDERLDDVLRDVSEYKSPGLDGKGTYQLRDDLMKTTSQYFLHYTRNERAKFVEQKKKHAKLFPNMKEYELTDLPEWNPLFQNILRVFECDRMDYILRCVLK-NPDHFG---SEETVELALFIVGTGLIEAKRHPSKLP-------NFLPMLSKPIEEGKNIKNLLE--EMLKSGKHSD--SGIFKWVIEL------LRQAHPDEDNLTME--LDQDNNKEAEETERLLRKKRAQEQRAKMMAKMNNMQKAFMQSHQGFFSEGMDVGDET----DGASIISPSTFPVVLGSKCTVTDSSIGSDPVQCILCQEEQSIDNDEKMFLMTCFQQKSSVFNKSGTK----PNSRDVSQITAELNGVTMTHVSSCGHILHSECWNKFYTTI----KERYRSLARTRSIDVLQSEYLCPLCNSLCNTVLPIL--PR-LEEEKSEDSLELSLSEFLSYVDKFSSELSTLPKKKVEKEDRKTKSRSFISMGVRMLQSYIR--VAELEQNENVMDMFP-------KKLMQLDAFDENSGQAIPLSWMVFSFTLQTLECIHREGGTNMFEEILERDWMFFYAFVQYLSSTAMATVYEPIQEYGTEVFNFFCDENNDFTLN---SVDVFGLMVSLRCLMSTCGHIFQEKQPNFMKIKQNQMNDVIFKVCFVAQYVKALLQTPGLHEDDQMQEGENESGQDDENVEYLVKAW-KYVQSMIGPDNQVVNGHVLKERVTSSLLPFLRCSAIFFHLLVGVSMPEDLKLKTMTDSLEMSSLLRYMNLPTNLSEALSFDKLFNDPTIKLMVDRWC--SDIRREQLKLVRPIKDCYLSSRRLVDLPEQYSTLIKRASGFKCP-TVGDTSRSPALCLICGEMICSQCYCCVNEKGMPNQSFGASAVHIQQCGQGVGAFLKIRDCEIYLLYNQRKGVFIAAPYLDSYGEPDRGFHRGNPLFLDKGRYERIQNYWLKHKIPTTIVQAMEKNRNLLAFDWNMI 1753
            ++ T L +E++++L++ VP +           Y      F   E ++AQ      +E++LC          LE+ + P+  CG+VF++G+PTY+C+DCA DPTCV C +CF  S H+ H+YR+  +SG GG+CDCGD EAW   P C KH+    +++E  DP   L ED+  R+  +     +Y V+++ WE+  ELP  L   E   + +  MLFNDE HTY++VI TL K V  C   +A+ FAT VD+ GR ++  G  + C +  ++    TSR  K PLK + +   +VAHQ     L++WL + +  SDGLRRIL  +  +    G  SS++++++  D +LWK AR   HQLFM+ +LMD+  ++ FA+ F KNY Q+  +F++DDHE ++SV +LSVQ +T PT+A ML+ E+ ++      F + L+       G   F+     Q  K +R   ++ D+ Y+L +KP +WSD+++ +FL  FD  ++LLK MQGMD   R    H+  EP WE+ F LQ+ L  +I M+  W  ++ +V      KC+  LM+ +         +   +  +S+    Y VS++ VS+H P+SR +AGL     K        ELL + +  P          LIE PLR LVL  Q +A MW+RNG+++ +QI+YYHNVK   EMFD+DV+++Q   S+M PNHFL ++L +++L+  FS+   G++   E      + +   L  E  +L+  ++ ER+   + +++A D ++RE+ H+L++ P   S LVK+LP     +D + +  ++ V+  V+ +K PGL G+G Y+L+ +  K  + YF H++R E++K  E ++K  +            LP + PLF +++ + + D M  I+  +L+   +H G   SE  ++  L ++G  L E K+H   +         F   +SKP E  KN  ++L   E L++  + +    + +W+++       +R++ P       E  + ++++++ ++ ER  + + A+ +R K+MA+M+ MQ+ F+  ++  F + +++   T    D + + S  T   +  ++  V +       V CILCQEEQ +  + +  ++  F Q+S+V +K+ +K    P   D   +  +L+    TH SSCGHI+H+ CW +++ ++    + R + L    S DV   E+LCPLC  L NTV+P+L  PR +   +   S + +L++++  + +    L  L K++    +  TK+   +   +++ + +      ++  +E++ +M         K  +++   +E+    I + W   ++T+Q++E I  +    +F  +  R      +  ++ ++         +Q +  ++F      ++   L     +D+F L+V L             +  +F  I     +  IF +  +A  ++ LL +    E++ M + EN   +++  V  L K   +Y  S +    ++ +G  L   V + ++PFL+CSA+FFH L GV  P D+++   +       L  Y++LP NL     F +  N   +  +++ WC  S+++R  L+  R        S +L++LPE YS+LI +AS F CP + GD SR+P LCL+CG ++CSQ YCC  E  +  +  GA   H   CG GVG FL++R+C++  L  + KG F + PYLD YGE D+G  RGNPL L K R+++IQ  W +H +   I  A E N+ L+  DW  +
Sbjct:   29 LQATDLTREVYQHLAHYVPKI-----------YCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRM-TTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKS-DTYYCMLFNDEVHTYEQVIYTLQKAV-NCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTK-PLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQLQRDFMEDDHERAVSVTALSVQFFTAPTLARMLITEENLMSIIIKTFMDHLR--HRDAQGRFQFERYTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGMDPITRQVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQCHGGYTDGEQPITLSICGHSVETIRYCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFPELLPLSELSPP--------MLIEHPLRCLVLCAQVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKDVVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKSLP-----EDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKAEEAQRKLKRQNREDTALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNGYAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQ---RQFVTCILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSKFIQDPEKYDPLFMHPDLS--CGTHTSSCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTSYDVENGEFLCPLCECLSNTVIPLLLPPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLRKEESTPNNASTKNSENVD-ELQLPEGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPI-MCWGSCAYTIQSIERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFCKLFASLVPNDSHEELPCILDIDMFHLLVGLVLAFPAL------QCQDFSGISLGTGDLHIFHLVTMAHIIQILLTS--CTEENGMDQ-ENPPCEEESAVLALYKTLHQYTGSAL---KEIPSGWHLWRSVRAGIMPFLKCSALFFHYLNGVPSPPDIQVPGTS---HFEHLCSYLSLPNNL--ICLFQE--NSEIMNSLIESWCRNSEVKR-YLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGSLLCSQSYCCQTE--LEGEDVGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPYLDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL 1755          
The following BLAST results are available for this feature:
BLAST of TCONS_00054716-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBR20.000e+031.13E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens G... [more]
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