TCONS_00054775-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054775-protein
Unique NameTCONS_00054775-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length358

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054775-protein ID=TCONS_00054775-protein|Name=TCONS_00054775-protein|organism=Clytia hemisphaerica|type=polypeptide|length=358bp
ILISDTILSRKMSISQNYCVKFAERPGVDGEPQPKHFSYTKCDFPSLEDG
ENFVIVKTLYLSVDPAQRCQMNEDTGVTYLLPWQIDEVITGLGSCVIVES
RNPKFKKGDLVLASLGKCKWQLYWKTNVEDLNPCVADGKLDIVYYGLPGL
TSILGVQLHGKLTSETSGSNKTFVVSAAAGSCGSLAGQFAKCYGCSNVIG
ICGSDAKCHLLKERLNFTGVINYKTENVEDRLRELCPNGVDLYFDNVGGT
ISEAVITNMVTEGRIILCGAISQYNKDLPYPPPVSERVSKILKERSIFND
RFLVLRYEDQFASGMESLKQLQPHVELLETVYEGLEKAGNAFCDMMNGKN
IGKMLVKC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034502XLOC_034502Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054775TCONS_00054775Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013149ADH_C
IPR016040NAD(P)-bd_dom
IPR011032GroES-like
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013149Alcohol dehydrogenase, C-terminalPFAMPF00107ADH_zinc_Ncoord: 183..279
e-value: 3.6E-18
score: 65.6
NoneNo IPR availableGENE3D3.40.50.720coord: 175..293
e-value: 2.7E-18
score: 65.8
NoneNo IPR availableGENE3D3.90.180.10coord: 306..358
e-value: 0.0082
score: 15.3
NoneNo IPR availableGENE3D3.90.180.10coord: 11..174
e-value: 7.8E-16
score: 57.9
NoneNo IPR availablePFAMPF16884ADH_N_2coord: 28..130
e-value: 5.0E-21
score: 74.5
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 144..289
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 28..133

Blast
[Close]
BLAST of TCONS_00054775-protein vs. Swiss-Prot (Human)
Match: PTGR2 (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 2.570e-104
Identity = 165/343 (48.10%), Postives = 220/343 (64.14%), Query Frame = 0 
Query:   20 VKFAERPGVDGEPQPKHFSYTKCDFP-SLEDGENFVIVKTLYLSVDPAQRCQMNEDTGVTYLLPWQIDEVITGLGSCVIVESRNPKFKKGDLVLASLGKCKWQLYWKTN-VEDLNPCVADGKLD--IVYYGLPGLTSILGVQLHGKLTSETSGSNKTFVVSAAAGSCGSLAGQFAKCYGCSNVIGICGSDAKCHLLKERLNFTGVINYKTENVEDRLRELCPNGVDLYFDNVGGTISEAVITNMVTEGRIILCGAISQYNKDLPYPPPVSERVSKILKERSIFNDRFLVLRYEDQFASGMESLKQL--QPHVELLETVYEGLEKAGNAFCDMMNGKNIGKMLV 356
            V    RPG +G P  ++F   +   P ++ +G+  V V+TLYLSVDP  RC+MNEDTG  Y+ PWQ+ +V+ G G  +I ES++    KGD V +     + ++    N +E ++P + DG L   +   G+PGLTS++G+Q  G +T+   GSNKT VVS AAG+CGS+AGQ     GCS V+GICG+  KC LL   L F   INYK +NV ++LRE CP GVD+YFDNVGG IS+ VI+ M     IILCG ISQYNKD+PYPPP+S  +  I KER+I  +RFLVL Y+D+F  G+  L Q   +  +++ ETV  GLE  G AF  MM G NIGK +V
Sbjct:    6 VVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ--VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITA---GSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
The following BLAST results are available for this feature:
BLAST of TCONS_00054775-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTGR22.570e-10448.10Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2... [more]
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