TCONS_00055041-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055041-protein
Unique NameTCONS_00055041-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length328

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055041-protein ID=TCONS_00055041-protein|Name=TCONS_00055041-protein|organism=Clytia hemisphaerica|type=polypeptide|length=328bp
MVRCGFCSRNMSSKKNSTAIPKDHRVLREGFLEKRVGMLKLWKSRYFVLL
EDLLCYFLKEEQKESLLPTGRIFFSDIVNVDRIEKKGHPFSMIIQTNHKK
HVMSCQSYQEREDWVNKLWEARESHKNKEQNDPIRRRSTRLGKDFKRITI
KKDPKHGIGCTIKNVAGAIFVSRIIPDGPVATSGVLRPGDQIIDINGARV
SECPIEKIKDIIRSSPEYIVCTVKPVTHYTSHEDSPQFVRSAYTEVDPEA
LQAGSDSDEETPYTQVEISAESMEDLCRNPSRKDESMEQRHGSGASGHGN
YMNSEVIDDHEKLCKKQTNYVELEFGAR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034670XLOC_034670Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055041TCONS_00055041Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR001478PDZ
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 26..125
e-value: 8.1E-14
score: 61.9
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 26..118
e-value: 5.5E-14
score: 52.5
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 25..123
score: 13.506
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 156..227
e-value: 2.5E-9
score: 47.0
IPR001478PDZ domainPFAMPF00595PDZcoord: 148..217
e-value: 7.3E-12
score: 45.4
IPR001478PDZ domainPROSITEPS50106PDZcoord: 147..227
score: 15.702
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 140..226
NoneNo IPR availableGENE3D2.30.42.10coord: 145..292
e-value: 3.6E-17
score: 61.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..303
NoneNo IPR availableCDDcd00821PHcoord: 28..118
e-value: 6.17654E-14
score: 65.2565
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 146..224
e-value: 3.57254E-15
score: 68.3622
IPR011993PH domain-likeGENE3D2.30.29.30coord: 7..135
e-value: 2.4E-23
score: 82.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 22..131

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055041-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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