TCONS_00055229-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055229-protein
Unique NameTCONS_00055229-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length560

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055229-protein ID=TCONS_00055229-protein|Name=TCONS_00055229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=560bp
MSSSPEVLIQELEETREKALQFERTARWWNESCVKWREKWGKENAEKNRL
IEKIENLNGRNRALIVEFQRVQCENAKLNSYIRQQEGFKKDIEQTVNRAL
NIPEDIKEVDEERRVARVEPIVEDIRLAKTMSNASPTTSIRSSTGKLSFS
PLNEVQDTFEQISMLPSGESLDSIENVSEKRLDSFENISGKPLDSFDKVS
GEPLDSFDDLIAPCAAEKRFYSTNESYPSLQDELTDLKRLIENLESTSSV
DTQEEKSSMFGNLLEKVEGYFMECDNYVQESKRELEASRALNDIIKQTNK
KKQDQPFSINHKETQTSGFQLPNLYSGAADLSAVLSSLSSIDSTGRNISF
NSGLPSIGMMSVLSSCTSIESGDRCTSVDVVVRDLRENIQRLQEENSNEW
SLREQTESELCSIKRELKQAEATIKDLREEACKKEIARHEIQSLKLLNEE
LDKKSKELIEVKSAHIKLKKSLENRSQEVGHEKMRTTQYESEVKKLRIKV
EQLKKDLLTEQEKNDFQSNQLRRTQRTLEEQQQINETLQIQIDQTSTRLK
YHQQRGSYNG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034784XLOC_034784Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055229TCONS_00055229Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..67
NoneNo IPR availableCOILSCoilCoilcoord: 375..395
NoneNo IPR availableCOILSCoilCoilcoord: 410..430
NoneNo IPR availableCOILSCoilCoilcoord: 227..247
NoneNo IPR availableCOILSCoilCoilcoord: 434..464
NoneNo IPR availableCOILSCoilCoilcoord: 486..548

Blast
[Close]
BLAST of TCONS_00055229-protein vs. Swiss-Prot (Human)
Match: C102A (Coiled-coil domain-containing protein 102A OS=Homo sapiens GN=CCDC102A PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.767e-27
Identity = 74/192 (38.54%), Postives = 117/192 (60.94%), Query Frame = 0 
Query:  376 TSVDVVVRDLRENIQRLQEENSNEWSLREQTESELCSIKRELKQAEATIKDLREEACKKEIARHEIQSLKLLNEELD-------KKSKELIEVKSAHIKLKKSLENRSQEVGHEKMRTTQYESEVKKLRIKVEQLKKDLLTEQEKNDFQSNQLRRTQRTLEEQQQINETLQIQIDQTSTRLKYHQQRGSYNG 560
            +S+D  + +LR  ++RLQ EN+ EW  RE+ E+E   ++RE K+  A + DL EEA    +AR   Q+   L+ +L        +K+KEL ++K  H KLKK  + +  E+ H   R  Q+E+EVKKLR++VE+LKK+L   +++ D   NQ R+ QR+L+EQ + +E LQ+Q++   +RL+  QQ     G
Sbjct:  334 SSMDRKMAELRGEMERLQAENAAEWGRRERLETEKLGLERENKKLRAQVGDL-EEA----LARRRRQTASALDCDLRASQAALFEKNKELADLKHVHGKLKKQFQEKVAELAHANRRVEQHEAEVKKLRLRVEELKKELAQAEDELDEAHNQARKLQRSLDEQTEQSENLQVQLEHLQSRLRRQQQNAPLFG 520
The following BLAST results are available for this feature:
BLAST of TCONS_00055229-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
C102A4.767e-2738.54Coiled-coil domain-containing protein 102A OS=Homo... [more]
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