TCONS_00055232-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055232-protein
Unique NameTCONS_00055232-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055232-protein ID=TCONS_00055232-protein|Name=TCONS_00055232-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
QTVKYLREKQMSIEKESFLQDIRQEELHVVDFMKLWFKYDKNKDGYLQKN
EMEDFLREMLEKKGKVDRLEEYYKSCLSNFDLNHDGLIELREFALIVPVE
KNYLEQFSESGAFTVEEYTKVFQHYDRDNNQYIEKEELVSFLRDLRKTQD
EEPTTTDLEVYKGFILQCCDSNKDGRISFTELKLLLVG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034785XLOC_034785Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055232TCONS_00055232Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 31..59
e-value: 0.012
score: 24.8
coord: 72..100
e-value: 25.0
score: 6.5
coord: 117..145
e-value: 2.3E-4
score: 30.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 120..182
e-value: 1.1E-11
score: 44.9
coord: 33..94
e-value: 1.8E-9
score: 37.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 27..62
score: 11.752
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 113..148
score: 12.282
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 68..103
score: 8.795
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 165..188
score: 6.312
IPR002048EF-hand domainCDDcd00051EFhcoord: 117..182
e-value: 7.31423E-7
score: 42.9201
NoneNo IPR availableGENE3D1.10.238.10coord: 46..85
e-value: 8.9E-11
score: 41.4
NoneNo IPR availableGENE3D1.10.238.10coord: 131..186
e-value: 4.9E-12
score: 45.4
NoneNo IPR availableGENE3D1.10.238.10coord: 11..45
e-value: 0.0013
score: 18.0
coord: 86..130
e-value: 6.7E-9
score: 35.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 40..52
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 170..182
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 81..93
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 126..138
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 29..186

Blast
[Close]
BLAST of TCONS_00055232-protein vs. Swiss-Prot (Human)
Match: CALB2 (Calretinin OS=Homo sapiens GN=CALB2 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 6.613e-26
Identity = 55/167 (32.93%), Postives = 98/167 (58.68%), Query Frame = 0 
Query:   10 QMSIEKESFLQDIRQEELHVVDFMKLWFKYDKNKDGYLQKNEMEDFLREMLEKKGKV---DRLEEYYKSCLSNFDLNHDGLIELREFALIVPVEKNYLEQFSESGAFTVEEYTKVFQHYDRDNNQYIEKEELVSFLRDLRKTQDEEPTTTDLEVYKGFILQCCDSNK 173
            Q+   +E+FL   RQ      +FM+ W KYD ++ GY++ NE++ FL ++L+K  +     +L+EY ++ L  FDLN DG + L E + ++PV++N+L +F +    T EE+  +F  YD+D + YI++ EL + L+DL +   +E     L  Y+  ++   ++ K
Sbjct:   90 QILPTEENFLLCFRQHVGSSAEFMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQTILRMFDLNGDGKLGLSEMSRLLPVQENFLLKF-QGMKLTSEEFNAIFTFYDKDRSGYIDEHELDALLKDLYEKNKKEMNIQQLTNYRKSVMSLAEAGK 255

HSP 2 Score: 90.5077 bits (223), Expect = 2.615e-22
Identity = 56/167 (33.53%), Postives = 89/167 (53.29%), Query Frame = 0 
Query:   26 ELHVVDFMKLWFKYDKNKDGYLQKNEMEDFLREM-LEKKG-----KVDRLEEYYKSCLSNFDLNHDGLIELREFALIVPVEKNYLEQFSESGAFTVEEYTKVFQHYDRDNNQYIEKEELVSFLRDLRKTQDEEPTTTDLEVYKGFILQCCDSNKDGRISFTELKLLL 186
            EL    F+++W  +D + +GY++  E+E+F +E+   +KG     K D   E  K  +  +D N DG IE+ E A I+P E+N+L  F +    + E + + ++ YD D + YIE  EL  FL DL K  +       L+ Y   IL+  D N DG++  +E+  LL
Sbjct:   15 ELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFMQKYDKNSDGKIEMAELAQILPTEENFLLCFRQHVGSSAE-FMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQTILRMFDLNGDGKLGLSEMSRLL 180
The following BLAST results are available for this feature:
BLAST of TCONS_00055232-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALB26.613e-2632.93Calretinin OS=Homo sapiens GN=CALB2 PE=2 SV=2[more]
back to top