TCONS_00055292-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055292-protein
Unique NameTCONS_00055292-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055292-protein ID=TCONS_00055292-protein|Name=TCONS_00055292-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MMVLSKIKRFISIAKDYMDRPKQRDKAIEELQEQFRKQEQKLTEQQDMIN
KLKTTLLKKCKKIEKLETRIETQENVLKEVTTKIRKKRKKMNKIKNKIEE
AGETVEETRDVMHSFIKTEKNWCPYAWCISDFAAKRKNARLRNEEYYVTS
EPFFMVSGYKAQAILYPNGYEKSQNKHMSIFIRLLEGPIDEHLRWPLICC
IEFGVIHEGELENACQINTNLSQCSEAFRRPSRDSDKSYGFFEFLPLTDL
NKYIENDTLVINISAWSINL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034835XLOC_034835Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055292TCONS_00055292Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR002083MATH/TRAF_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..111
NoneNo IPR availableGENE3D1.10.287.620coord: 14..109
e-value: 2.4E-6
score: 26.6
IPR008974TRAF-likeGENE3D2.60.210.10coord: 110..265
e-value: 1.9E-23
score: 82.6
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 125..263
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 122..265
score: 17.118

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055292-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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