TCONS_00055310-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055310-protein
Unique NameTCONS_00055310-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length558

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055310-protein ID=TCONS_00055310-protein|Name=TCONS_00055310-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
MKKYGYFLLIFTTICLCHGKPANEENNAQIEVNIDSRGMMSLQKFGWFKP
KFSSEAGQIQANSEALAQSLRDFQKFAHIPVTGEYDADTQRMMQSPRCGM
SDKTGDTRLKRKKRYNRHGTKWHKKEITWAVENDNDDGITREMVQYTMKR
SFDKWQAVTNLEFKELVGRPVNSADIRVRFERGTHDDSYPFDGPGGTLAH
AFYPHDNTGLAGDVHFDDAEKYTIKDDSGRSYKKLLWVAVHELGHSIGLE
HSDLKGAIMYPWYQHFEGSDFDLTDDDRLGVQMIYGGKDPAVTNLPVTAI
TPSTPSLQTVRKSSCTNKIGAALLGIDGRTYIFNGQYFYILYQSGRGLMG
VEEGPLLISAKFDGLITFDAIFRRPNDGMIIAFHGDSYTIYKGYKKLRPE
EGGGTRKISDGFQKLEEGFRDVDAAIYNKENNKLYLFKGEKYWRFSTTFN
SNDFVRDNNYPQSIASRWHGLPKSVDGALLWQDDKIFFFKDNEYYRWNQR
LQRVHSGYPQKLTSTFLECTKGTFQSEREMAADSSSIEITPSFLGLSIAL
LVHRIVVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034852XLOC_034852Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055310TCONS_00055310Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021190Pept_M10A
IPR018487Hemopexin-like_repeat
IPR006026Peptidase_Metallo
IPR000585Hemopexin-like_dom
IPR002477Peptidoglycan-bd-like
IPR001818Pept_M10_metallopeptidase
IPR024079MetalloPept_cat_dom
IPR033739M10A_MMP
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021190Peptidase M10APRINTSPR00138MATRIXINcoord: 93..106
score: 43.29
coord: 273..286
score: 52.7
coord: 238..263
score: 61.54
coord: 148..163
score: 37.04
coord: 174..202
score: 59.88
IPR018487Hemopexin-like repeatsSMARTSM00120HX_rpt_3coord: 368..414
e-value: 0.15
score: 21.2
coord: 422..473
e-value: 2.4E-6
score: 37.1
coord: 319..367
e-value: 7.8
score: 8.8
coord: 475..519
e-value: 4.3E-8
score: 42.9
IPR018487Hemopexin-like repeatsPFAMPF00045Hemopexincoord: 475..519
e-value: 3.5E-7
score: 30.0
coord: 422..472
e-value: 1.6E-10
score: 40.6
IPR018487Hemopexin-like repeatsPROSITEPS51642HEMOPEXIN_2coord: 419..471
score: 13.263
IPR018487Hemopexin-like repeatsPROSITEPS51642HEMOPEXIN_2coord: 365..415
score: 8.115
IPR018487Hemopexin-like repeatsPROSITEPS51642HEMOPEXIN_2coord: 472..519
score: 14.399
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 118..287
e-value: 2.6E-38
score: 143.3
IPR000585Hemopexin-like domainGENE3D2.110.10.10coord: 312..522
e-value: 2.7E-42
score: 144.8
IPR000585Hemopexin-like domainCDDcd00094HXcoord: 326..519
e-value: 3.86624E-36
score: 132.05
IPR000585Hemopexin-like domainSUPERFAMILY50923Hemopexin-like domaincoord: 315..520
NoneNo IPR availablePIRSFPIRSF001191MMP_stromelysincoord: 1..540
e-value: 1.7E-123
score: 410.9
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 114..286
IPR002477Peptidoglycan binding-likePFAMPF01471PG_binding_1coord: 42..93
e-value: 9.0E-7
score: 28.9
IPR002477Peptidoglycan binding-likeSUPERFAMILY47090PGBD-likecoord: 41..102
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 121..286
e-value: 1.2E-49
score: 168.1
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 23..293
e-value: 2.6E-69
score: 232.9
IPR033739Peptidase M10A, catalytic domainCDDcd04278ZnMc_MMPcoord: 121..286
e-value: 8.02322E-63
score: 204.36

Blast
[Close]
BLAST of TCONS_00055310-protein vs. Swiss-Prot (Human)
Match: MMP14 (Matrix metalloproteinase-14 OS=Homo sapiens GN=MMP14 PE=1 SV=3)

HSP 1 Score: 245.743 bits (626), Expect = 7.540e-74
Identity = 161/501 (32.14%), Postives = 261/501 (52.10%), Query Frame = 0 
Query:   42 LQKFGWFKPKFSSEAGQIQANSEALAQSLRDFQKFAHIPVTGEYDADTQRMMQSPRCGMSDKTGDTRLK---RKKRYNRHGTKWHKKEITWAVENDNDDGITREMVQYT----MKRSFDKWQAVTNLEFKELVGRPV-----NSADIRVRFERGTHDDSYPFDGPGGTLAHAFYPHDNTGLAGDVHFDDAEKYTIKDDSGRSYKKLLWVAVHELGHSIGLEHSDLKGAIMYPWYQHFEGSDFDLTDDDRLGVQMIYGGKDPAVTNLPVTAITPSTPSLQTVRKSS------CTNKIGAALLGIDGRTYIFNGQYFYILYQSGRGLMGVEEGPLLISAKFDGL-ITFDAIFRRPNDGMIIAFHGDSYTIYKGYKKLRPEEGGGTRKISDGFQKLEEGFRDVDAAIYNKENNKLYLFKGEKYWRFSTTFNSNDFVRDNNYPQSIASRWHGLPKSVDGALLWQDDKI-FFFKDNEYYRWNQRLQRVHSGYPQKLTSTFLECTKG 522
            LQ++G+  P         Q + ++L+ ++   QKF  + VTG+ DADT + M+ PRCG+ DK G   +K   R+KRY   G KW   EIT+ ++N      T ++ +Y     ++++F  W++ T L F+E+    +       ADI + F  G H DS PFDG GG LAHA++P  N G  GD HFD AE +T++++       +  VAVHELGH++GLEHS    AIM P+YQ  +  +F L DDDR G+Q +YGG+    T +P    T S PS+    K+       C        + + G  ++F  ++F+ +    R    ++  P+ I   + GL  + +  + R  DG  + F GD + ++     L P      +++  G    +     +DAA++   N K Y F+G KY+RF+    +     D+ YP++I   W G+P+S  G+ +  D+   +F+K N+Y+++N +  +V  GYP+     ++ C  G
Sbjct:   39 LQQYGYLPP--GDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDKFG-AEIKANVRRKRYAIQGLKWQHNEITFCIQN-----YTPKVGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIG--GDTHFDSAEPWTVRNEDLNG-NDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVPDKPKNPTYGPNICDGNFDTVAM-LRGEMFVFKERWFWRV----RNNQVMDGYPMPIGQFWRGLPASINTAYER-KDGKFVFFKGDKHWVFD-EASLEPGYPKHIKELGRGLPTDK-----IDAALFWMPNGKTYFFRGNKYYRFNEELRA----VDSEYPKNIKV-WEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSG 511
The following BLAST results are available for this feature:
BLAST of TCONS_00055310-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMP147.540e-7432.14Matrix metalloproteinase-14 OS=Homo sapiens GN=MMP... [more]
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