TCONS_00055336-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055336-protein
Unique NameTCONS_00055336-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length688

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055336-protein ID=TCONS_00055336-protein|Name=TCONS_00055336-protein|organism=Clytia hemisphaerica|type=polypeptide|length=688bp
MGKPNYDSNTFNKKKNSSNPDREKPAAGSRMRDKATIKRLKMYKGGKPVR
DKKGKIIIAAEYQSKVKSGEVARVEPNRKWFGNTKVITQNALQTFQDEMG
KAMSNPYKVVMKASKLPLSLLNDRQKTARVHLLDTESFENTFGPKSHRKR
ANIAAGDLSGLAALAEQNTDAYDKTKDGDLLENSEIVEKDEARDPKFSKG
QSKRIWNELYKVIDSSDVVIQVLDARDPNGTRSKHIEDFMKNEKKHKHLI
FILNKCDLVPTWVTRKWVALLSSEVPTLAFHASVTNPFGKGALIQLLRQF
GKLHQGKKNISVGFIGYPNVGKSSIINTLKKKKVCKAAPIPGETKVWQYV
TLMRKIYLIDCPGVVYPSGDTETEIVLKGVVRVENLKVPSEHITEVLNRV
KEEYIRNTYKIQHWEDAEDFMEQFCKKSGRLLKGGEPDIETGARMILHDF
QRGRLPYFVPPPKSEEESKTDEKDTKDTETSSEIPHVAKQNFQSLNVVPE
FQGDDLQTDIKEDDEPCEVDGEVESDISDSENEDDLIEQDINADTKSPSE
KSLEARNDTCTKGDDNELIDSSLLDVLSSKEKQFLKIKETESKGDSSFRV
TDTTDALCVEALSDDPDEGTSYKETYTKQKKRKKRVSFEMLQDDDSKSKK
TKKEPRMTTNKKKIGSKFYQETNVKNKNKSKKKKGPKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034862XLOC_034862Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055336TCONS_00055336Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR023179GTP-bd_ortho_bundle
IPR012971NOG2_N_dom
IPR030378G_CP_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPRINTSPR00326GTP1OBGcoord: 312..332
score: 44.5
coord: 358..373
score: 22.31
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 312..414
e-value: 1.5E-14
score: 53.9
IPR023179GTP-binding protein, orthogonal bundle domainGENE3D1.10.1580.10coord: 373..459
e-value: 1.3E-18
score: 66.7
IPR012971Nucleolar GTP-binding protein 2, N-terminal domainPFAMPF08153NGP1NTcoord: 42..172
e-value: 2.1E-51
score: 173.4
NoneNo IPR availableGENE3D1.20.120.430coord: 201..372
e-value: 1.2E-30
score: 106.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..688
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..484
NoneNo IPR availableCDDcd01858NGP_1coord: 208..364
e-value: 2.11125E-119
score: 355.068
IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainPROSITEPS51721G_CPcoord: 206..367
score: 38.908
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 202..375

Blast
[Close]
BLAST of TCONS_00055336-protein vs. Swiss-Prot (Human)
Match: NOG2 (Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1)

HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0
Identity = 366/736 (49.73%), Postives = 471/736 (63.99%), Query Frame = 0 
Query:    1 MGKPNYDS-NTFNKKKNSSNPDREKPAAGSRMRDKATIKRLKMYKGGKPVRDKKGKIIIAAEYQSKVKSGEVARVEPNRKWFGNTKVITQNALQTFQDEMGKAMSNPYKVVMKASKLPLSLLNDRQK--TARVHLLDTESFENTFGPKSHRKRANIAAGDLSGLAALAEQNTDAYDKTKDGDLLENSEIVEKDEARDPKFSKGQSKRIWNELYKVIDSSDVVIQVLDARDPNGTRSKHIEDFMKNEKKHKHLIFILNKCDLVPTWVTRKWVALLSSEVPTLAFHASVTNPFGKGALIQLLRQFGKLHQGKKNISVGFIGYPNVGKSSIINTLKKKKVCKAAPIPGETKVWQYVTLMRKIYLIDCPGVVYPSGDTETEIVLKGVVRVENLKVPSEHITEVLNRVKEEYIRNTYKIQHWEDAEDFMEQFCKKSGRLLKGGEPDIETGARMILHDFQRGRLPYFVPPPKSE----------------EESKTDEKDTKDTETSSE------------------------IPHVAKQNFQSLNVVPEFQGDDLQTDIKEDDEPCEVDGEVESDISDSENEDDLIEQDINADTKSPSEKSLEARNDTCTKGDDNELIDSSLLDVLSSKEKQFLKIKETESKGDSSFRVTDTTDALCV-------EALSDDPDEGTSYKETYTKQKKRKKRVSFEMLQDDDSKSKKTKKEPRMTTNK---KKIGSKFYQETNVKNKNKSKKK 683
            M KP Y   +T N  K S+NPDR + A G  MRD+ATI+RL MY+  K  R+ +GKII   +YQS V SG VARVEPN KWFGNT+VI Q++LQ FQ+EM   M +PYKVVMK SKLP+SLL+DR +    +VH+LDTESFE TFGPKS RKR N+ A D+  L   AE +T++YD+ KD DL+     V ++EA++  + KGQSKRIW ELYKVIDSSDVV+QVLDARDP GTRS HIE ++K EK  KHLIF+LNKCDLVPTW T++WVA+LS + PTLAFHAS+TNPFGKGA IQLLRQFGKLH  KK ISVGFIGYPNVGKSS+INTL+ KKVC  API GETKVWQY+TLMR+I+LIDCPGVVYPS D+ET+IVLKGVV+VE +K P +HI  VL R K EYI  TYKI  WE+AEDF+E+   ++G+LLKGGEPD++T  +M+L+D+QRGR+P+FV PP +E                 E+  +    + TET+ E                        I    +QNF  +NVVP+F GDDL         P EV     SD+ +        E++     +  +E+S     +     D   +I +  LD   +K ++FL   + ++K  S+ R++               + L +D D+    K    K KKRK +   E    + +    T KE R    +   KK+G ++Y+  NVKN+N++KKK
Sbjct:    1 MVKPKYKGRSTINPSKASTNPDRVQGAGGQNMRDRATIRRLNMYRQ-KERRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYKVVMKQSKLPMSLLHDRIRPHNLKVHILDTESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGV-RNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANTEMQQILTRVRQNFGKINVVPQFSGDDLV--------PVEV-----SDLEEELESFSDEEEEEQEQQRDDAEESSSEPEEENVGNDTKAVIKA--LDEKIAKYQKFL--DKAKAKKFSAVRISKGLSEKIFAKPEEQRKTLEEDVDDRAPSK----KGKKRKAQREEEQEHSNKAPRALTSKERRRAVRQQRPKKVGVRYYETHNVKNRNRNKKK 713
The following BLAST results are available for this feature:
BLAST of TCONS_00055336-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOG20.000e+049.73Nucleolar GTP-binding protein 2 OS=Homo sapiens GN... [more]
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