TCONS_00055350-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055350-protein
Unique NameTCONS_00055350-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length174

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055350-protein ID=TCONS_00055350-protein|Name=TCONS_00055350-protein|organism=Clytia hemisphaerica|type=polypeptide|length=174bp
MEDETKEEVVIDPWLRTTEKRIEDARIKKEKGTALFKDKDFRGAGQCYIN
ALKDIIPILQPSDQTEESTIKELKEALFSNLAVCQLKLQQYQRVIENCTK
SLDINAQNVKCLYRRASAYLQCRDRGSARRDIDRIYELEPSNTIVRELET
KLSSLDIKADARDAAMMKSFLSSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034868XLOC_034868Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055350TCONS_00055350Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 75..108
e-value: 0.083
score: 22.0
coord: 109..142
e-value: 2.8
score: 16.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 86..168
e-value: 4.4E-12
score: 45.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 16..146
NoneNo IPR availableGENE3D1.10.150.160coord: 16..85
e-value: 3.3E-10
score: 39.4
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 75..142
score: 11.753

Blast
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BLAST of TCONS_00055350-protein vs. Swiss-Prot (Human)
Match: FKBP4 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 1.832e-17
Identity = 47/136 (34.56%), Postives = 76/136 (55.88%), Query Frame = 0 
Query:   14 WLRTTEKRIEDARIKKEKGTALFKDKDFRGAGQCYINALKDIIPILQ--PSDQTEEST-IKELKEALFSNLAVCQLKLQQYQRVIENCTKSLDINAQNVKCLYRRASAYLQCRDRGSARRDIDRIYELEPSNTIVR 146
            W   +E+++E + I KE+GT  FK+  ++ A   Y    K I+  L+   S   EE+   + L+ A   NLA+C LKLQ +   IE+C K+L++++ N K L+RR  A+L   D   AR D  ++ +L P+N   +
Sbjct:  259 WEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQY----KKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 390
The following BLAST results are available for this feature:
BLAST of TCONS_00055350-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FKBP41.832e-1734.56Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo ... [more]
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