TCONS_00055352-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055352-protein
Unique NameTCONS_00055352-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length488

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055352-protein ID=TCONS_00055352-protein|Name=TCONS_00055352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
QTWDLKSEMGSLELNEKTPRNKNTRNFVEEKKEGSYATKVEEYSSSFTIH
GLSRSIHTNSRLERIFWALTLSLAIVVACLLVQTLINKFWRQDVYVKSET
RVTKNNTFPAVTFCLRPIAQFFKKYEFCELRANDALPGKFHPSLKSCNTK
AAWWETLFHFENMLEFSYVPGQIEIDAVPARNFNIMCPRSSVSSMCVQDY
LDEKYFRTLNGSWDCIQWNYNGDFSNSQNRIDLQLTVDSFHEAITSVVAY
VHDHQESPIPSDRFVRFERFSNTEIQIKKSIRKKIKRESPNNCENQYYNN
PKNIFPGKYSVEACIETNTCLEALKKCGEVIDFCRSFIPHPLLERHWVAN
QSLVDVHDCLYEGYRKGLFDADGEICPPPCDRTFFSTSMSATRRIPPTSA
VVSLLFTERNVYETQTETVLYTWEDVLAGVGGMIGLFCGFSILSFAELII
YAGLKILLFFRKDKQKRRRDYEMNDDIPGSAVNQTVNQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034869XLOC_034869Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055352TCONS_00055352Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPRINTSPR01078AMINACHANNELcoord: 417..431
score: 28.27
coord: 246..264
score: 22.53
coord: 104..120
score: 33.41
coord: 431..447
score: 44.24
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 43..451
e-value: 1.6E-39
score: 136.0
NoneNo IPR availableGENE3D1.10.287.770coord: 397..457
e-value: 1.6E-12
score: 46.7
NoneNo IPR availableGENE3D1.10.287.770coord: 48..111
e-value: 0.0093
score: 15.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055352-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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