TCONS_00055451-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055451-protein
Unique NameTCONS_00055451-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length488

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055451-protein ID=TCONS_00055451-protein|Name=TCONS_00055451-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MEVVVGTYNHVIFGFSFKLENKKDKKVWQFGPLFTDQGHAGCIKSVSSNG
RYLATGSTDETIRLFDLKKHVEVGTLMEQTGSITSLEFCGTTHLLSGSED
GTICVWKSRSWELLKKLKGHRDKINSLSLHPSGRLALSVSKDKYIRTWNL
ITGRPAYTTNLKEVAELVRWSPKGDCYAITVGSKVTFHQITGADDPVVYK
YDKYILALEFLTENVVCIAGDSEDIIFYDYKKKIVLQRLEAHKLRTKAIC
LTDNPYLPNDKWMLFTTSSDGNLKAWTVSKSDLEKKPTLLAELDMPGRPT
CMTLKIPTDLQTYIKEEQTKEEQMEPKTKNQKEEKDEKVVEDEKEEESME
EDEEEKEEGDEIDEEDGEEVSGESEEEEEDEGEESEEEQDDESDEEETAM
ADSEDANSVAGEEGVGTGYSEDEFDDDESSSENEEEEVSSSEEEEEEEMV
EEKVVVEDVKSKSRKKKISKQDSTVQPKKVKKKKKSVG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034893XLOC_034893Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055451TCONS_00055451Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR0110426-blade_b-propeller_TolB-like
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..451
NoneNo IPR availableCOILSCoilCoilcoord: 375..395
NoneNo IPR availableCOILSCoilCoilcoord: 330..357
NoneNo IPR availableGENE3D1.10.10.670coord: 104..166
e-value: 1.5E-19
score: 69.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..488
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 69..107
e-value: 7.1E-6
score: 35.5
coord: 194..229
e-value: 450.0
score: 0.3
coord: 110..149
e-value: 1.1E-7
score: 41.5
coord: 29..66
e-value: 9.9E-4
score: 28.4
coord: 232..277
e-value: 8.0
score: 11.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 35..66
e-value: 9.4E-4
score: 19.9
coord: 111..149
e-value: 6.8E-5
score: 23.5
coord: 81..107
e-value: 0.0049
score: 17.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 76..116
score: 9.439
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 117..158
score: 14.418
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 167..269
e-value: 2.9E-6
score: 26.2
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 270..305
e-value: 0.11
score: 11.2
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 4..103
e-value: 1.7E-19
score: 69.4
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 136..150
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 36..158
score: 25.707
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 33..302

Blast
[Close]
BLAST of TCONS_00055451-protein vs. Swiss-Prot (Human)
Match: PK1IP (p21-activated protein kinase-interacting protein 1 OS=Homo sapiens GN=PAK1IP1 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 9.451e-80
Identity = 131/351 (37.32%), Postives = 206/351 (58.69%), Query Frame = 0 
Query:    1 MEVVVGTYNHVIFGFSFKLENKK--DKKVWQFGPLFTDQGHAGCIKSVSSNGRYLATGSTDETIRLFDLKKHVEVGTLMEQTGSITSLEFCGTTHLLSGSEDGTICVWKSRSWELLKKLKGHRDKINSLSLHPSGRLALSVSKDKYIRTWNLITGRPAYTTNLKEVAELVRWSPKGDCYAITVGSKVTFHQITGADDPVVYKYDKYILALEFLTENVVCIAGDSEDIIFYDYKKKIVLQRLEAHKLRTKAICLTDNPYLPNDKWMLFTTSSDGNLKAWTVSKSDLEKKPTLLAELDMPGRPTCMTLKI-----------PTDLQTYIKEEQTKEEQMEPKTKNQKEEKDEK 338
            ME+V G Y  V+FGF+   E +   D + W     FT   H   + +V+ N R++ TGS DETI ++D+KK +E G L+  +G+IT L+F G  HL+SG+EDG IC+W ++ WE LK +K H+ ++  LS+HPSG+LALSV  DK +RTWNL+ GR A+  N+K+ A +V WSP+G+ Y + + +K+  +Q+  A        +K I +++FL+E+V+ +AGD E I F+D    + L   +AH+ R K +   + P    +  ++ + SSDG +K W + K D +  P+LL E++   R TC+ + +           P    + + +EQ+K  + EP     KEEK  K
Sbjct:    1 MELVAGCYEQVLFGFAVHPEPEACGDHEQWTLVADFTHHAHTASLSAVAVNSRFVVTGSKDETIHIYDMKKKIEHGALVHHSGTITCLKFYGNRHLISGAEDGLICIWDAKKWECLKSIKAHKGQVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIKQNAHIVEWSPRGEQYVVIIQNKIDIYQLDTASISGTITNEKRISSVKFLSESVLAVAGDEEVIRFFDCDSLVCLCEFKAHENRVKDMFSFEIP----EHHVIVSASSDGFIKMWKL-KQDKKVPPSLLCEINTNARLTCLGVWLDKVADMKESLPPAAEPSPVSKEQSKIGKKEPGDTVHKEEKRSK 346
The following BLAST results are available for this feature:
BLAST of TCONS_00055451-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PK1IP9.451e-8037.32p21-activated protein kinase-interacting protein 1... [more]
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