TCONS_00055461-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055461-protein
Unique Name	TCONS_00055461-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	874

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055461-protein ID=TCONS_00055461-protein|Name=TCONS_00055461-protein|organism=Clytia hemisphaerica|type=polypeptide|length=874bp
MSDNESDDEFLSADEGEYEDGKGKTSIDEDEVDEIMDLLMNKEQISNKNE
SLLSANPTAKKKNSSINETTTNSIKKQEEPSNDQITKDENKKLKIGEENQ
EIKSAESNELRKKFMPENERPLEVSSDKDENETEEPPLESLEDMIEESLK
DESKTNTENQIEDTKENHDQLIEQNEVEVDNQESPIIMEVLSENNKEIES
LEIVDENQAGQQESSKEETKPKQPNELSSLKSNVKVTTDSDTIEKNEDST
SSDKNVKEIPVVKSETSIENEVENTRHDLDDLDLDDDSDEEENLNKPCEN
VSENVTEEVQEQPVAQDLPVKEVENECNESTTENVLNEDTPTIPESETKE
CTESQTNDSCDSGISVANDDIPNLEKNKQLSGEDETESSTPTSEDKPCTP
ENDSETQEETEPEGVDSFDEGNEWGDWGNEEIEVENKSVNQNNEKSSKSV
SEKPQTQPEPPKQTQQSQAASQPHGDWGWDSWADDFLIQAAGKVSNMLES
VEDQLGIPDPTKMAHVVSKEERLSPKHSPAHKNKDKVKSVEVPKTKEEPP
VPQQQQQQQQTPAAPTGGSSWFGGFGASLSGLVQNTSTDLVTGGIGALEF
IGKKTVDMLSDGDPGLRQARDTIAGKKKTNLSALLQEAKETSEKNPSTRA
KTSDEMNFNDYFEKFQGNINLDALEMLSNECDNKLERILRLQSHEAKQET
EEVLAETQEKFSLPEDIEESQFNSDFKKDLFATTKQLKMKVTCSKLLNTW
TKLKEKSKNTATEPKECFNNTISGLAELTSKCVEFYRKVADMFLATDMQA
RDLALQRASALQSISVMFLIELTQLTNNFAQQIADNVDPQKIVTDIYLEG
SNCSSIVRDCHDLVLPILQCCIVK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034898	XLOC_034898	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055461	TCONS_00055461	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007998	DUF719

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 674..694
None	No IPR available	COILS	Coil	Coil	coord: 154..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 514..571
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..482
IPR007998	Protein of unknown function DUF719	PFAM	PF05334	DUF719	coord: 476..667 e-value: 7.0E-33 score: 114.4

Blast

[Close]

BLAST of TCONS_00055461-protein vs. Swiss-Prot (Human)
Match: F1142 (Protein FAM114A2 OS=Homo sapiens GN=FAM114A2 PE=1 SV=4)

HSP 1 Score: 159.458 bits (402), Expect = 1.880e-41
Identity = 139/503 (27.63%), Postives = 239/503 (47.51%), Query Frame = 0

Query:  428 GNEEIEVENKSVNQNNEKSSKS-----VSEKPQTQPEPPKQT------QQSQAASQPHGDWG-WDSWADDFLIQAAGKV-------SNMLESVEDQLGIPDPTKMAHVVSKEERLSPKHSPAHKNKDKVKSVEVPKTKEEPPVPQQQQQQQQTPAAPTGGSSWFGGFGASLSGLVQNTSTDLVTGGIGALEFIGKKTVDMLSDGDPGLRQARDTIAGKKKTNLSALLQEAKETSEKNPS--TRAKTSDEMNFNDYFEKFQGNINLDALEMLSNECDNKLERILRLQSHEAKQETEEVLAETQEKFSLPE----DIEESQFNSDFKKDLFATTKQLKMKVTCSKLLNTWTKLKEKSKNTATEP------------------------KECFNNTISGLAELTSKCVEFYRKVADMFLATDMQARDLALQRASALQSISVMFLIELTQLTNNF--------AQQIADNVDPQKIVTDIYLEGSNCSSIVRDCHDLVLPILQCCIV 873
            GN E    ++SV+Q  +  SKS       ++P+T+P    +T      Q + +   P   WG W SW    L  A+  V       SN++E  E  LGIP P++    +S E +     + A +N++                           ++P  G+  FG F +++S  VQ+T   +++GG+ ALEFIGKKT+D++++GDPG ++ +  +   +   LS +L+EAKE  E   S     +T  + ++   F++FQG  +L+ALEMLS E + K++ IL   S E  +  +  L + +E FSL E    + EE + + DF KD+     QL +     KL        E  + + T+P                        ++     I  LAELT+  +E + K A + L    Q    A++R+  L  ++++   EL+ L+  F         +++AD ++P  ++T ++LE SN +S ++D   L+LP+L+  ++
Sbjct:   22 GNCEPAKNSESVDQGAKPESKSEPVVSTRKRPETKPSSDLETSKVLPIQDNVSKDVPQTRWGYWGSWGKSILSSASATVATVGQGISNVIEKAETSLGIPGPSE----ISTEVKYVAGETNAKENEN---------------------------SSPVAGA--FGVF-STISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLM--NRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVT-AIERSQTLSQMTIVLCKELSSLSKEFTTCLTTAGVKEMADVLNP--LITAVFLEASNSASYIQDAFQLLLPVLEISLI 485

The following BLAST results are available for this feature:

BLAST of TCONS_00055461-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055461-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
F1142	1.880e-41	27.63	Protein FAM114A2 OS=Homo sapiens GN=FAM114A2 PE=1 ...	[more]

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TCONS_00055461-protein (polypeptide) - C. hemisphaerica