TCONS_00055466-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055466-protein
Unique Name	TCONS_00055466-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	468

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055466-protein ID=TCONS_00055466-protein|Name=TCONS_00055466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
SESEDESIEEDEANMSDASGNDNESDSAENSLADDDDNEENKESGNEEQE
ENEESLSEYEDDDGDFEDGDDGMMNLDLSKIPKELLREDQATLIADEDEE
EDINNFMAINQSSEKRKGEATRSQLDILDKLLESRIRLQKSMQVTNTLPQ
NNQMKNFLKEGGPQIQEAHREAKASLTGMLNNLLKLQEKLFKATNETKKL
LSSESTADDAKKRKKKKIDEDEEIPSDTDDEANKSEIESESDAENLTEEG
NVLNLPSKRKSNLSLDDYEEELSKRHKAFCGYRDTTILKWYDKTRLMTGK
MNKGFSAFETSTLQQIKQVLSDKNRLMKRCQLKRTQYKILGKSEEEANPA
EEVDSHLTNYDAEIFDDSDFYHEMLKELIERKSNLTNGNEDDPIASGRRW
LELQKLRTKTKRKVDTRASKGRKVRYDIHSKLVSFMAPQEIGSMSDQARN
DLFSSLFGGMVNNDVIGR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034901	XLOC_034901	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055466	TCONS_00055466	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025160	AATF
IPR012617	AATF_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
IPR025160	AATF leucine zipper-containing domain	PFAM	PF13339	AATF-Che1	coord: 114..293 e-value: 4.4E-27 score: 95.4
IPR012617	Apoptosis-antagonizing transcription factor, C-terminal	PFAM	PF08164	TRAUB	coord: 371..457 e-value: 1.9E-26 score: 92.3

Blast

[Close]

BLAST of TCONS_00055466-protein vs. Swiss-Prot (Human)
Match: AATF (Protein AATF OS=Homo sapiens GN=AATF PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.651e-77
Identity = 158/394 (40.10%), Postives = 228/394 (57.87%), Query Frame = 0

Query:   88 EDQATLIADEDEEED--INNFMAINQSSEKRKGEATRSQLDILDKLLESRIRLQKSMQVTNTLPQNNQMKNFLKEGGPQIQEAHREAKASLTGMLNNLLKLQEKLFKATNETKKLLSSESTADDAKKRKKKKIDEDEEIPSDTDDEANKSEIESESDAENLTEEG--NVLNLPSKRKSNLSLDDYEEELSKRHKAFCGYRDTTILKWYDKTRLMTGKMNKGFSAFETSTLQQIKQVLSDKNRLMKRCQLKRTQYKILGKSEEEANPAEE-------------VDSHLTNYDAEIFDDSDFYHEMLKELIERKSNLTNGNEDDPIASGRRWLELQKLRTKTKRKVDTRASKGRKVRYDIHSKLVSFMAPQEIGSMSDQARNDLFSSLFGGMVNND 464
            ED+A    D + E+D  +  F ++  S E  KG A ++Q+ + D+LLE RI+LQK++  TN LPQ +    F  +GGP+   A + +  +L  +L +L+ LQE+L     +T+ L+                          T   A   EI SE D   L EE       +P+KRK  L ++DY   ++KR   F  YR+ T+ KW+DKT+L +GK+ KGF AFE S L QI  +L DK RL++R Q KR+ Y++LGK E  A P  E              ++HL + D EIFDD DFYH++L+ELIERK++  + N  D +A GR+WL +QKLR+K  +KVD +ASKGRK+R+ + SKL+SFMAP +  +M+D AR +L+ SLFG +   D
Sbjct:  195 EDRA---GDRNSEDDGVVMTFSSVKVSEEVEKGRAVKNQIALWDQLLEGRIKLQKALLTTNQLPQPDVFPLFKDKGGPEFSSALKNSHKALKALLRSLVGLQEELLFQYPDTRYLVDG------------------------TKPNAGSEEISSEDD--ELVEEKKQQRRRVPAKRK--LEMEDYPSFMAKRFADFTVYRNRTLQKWHDKTKLASGKLGKGFGAFERSILTQIDHILMDKERLLRRTQTKRSVYRVLGKPEPAAQPVPESLPGEPEILPQAPANAHLKDLDEEIFDDDDFYHQLLRELIERKTSSLDPN--DQVAMGRQWLAIQKLRSKIHKKVDRKASKGRKLRFHVLSKLLSFMAPIDHTTMNDDARTELYRSLFGQLHPPD 555

The following BLAST results are available for this feature:

BLAST of TCONS_00055466-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055466-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AATF	2.651e-77	40.10	Protein AATF OS=Homo sapiens GN=AATF PE=1 SV=1	[more]

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TCONS_00055466-protein (polypeptide) - C. hemisphaerica