TCONS_00055469-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055469-protein
Unique NameTCONS_00055469-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length503

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055469-protein ID=TCONS_00055469-protein|Name=TCONS_00055469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=503bp
MAPTTGDLMDLNDVQASKQHTHAVVRDYISQPRLNYKTVSGVNGPLVILD
QVKFPKFAEIVSLTLPDGTQRSGQVLEVSGSKAVVQVFEGTSGIDAKHTA
CEFTGDILRTPISSDMLGRVFNGSGKPIDNGPPILAEDYLDINGQPINPW
SRIYPEEMIQTGISAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAG
LVKHGKGTMDYSDDNFAIVFAAMGVNRETARFFEQDFKENGSMENVCLFL
NLANDPTIERIITPRLALTAAEYLAYQCEKHVLVILTDMSSYAEALREVS
AAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDI
THPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMT
RKDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSDDLLYLEFLQKFEKN
FIAQGNYENRTIFESLDIGWKLLRIFPKEMLKRIPAKTLAEFYQRDGGKG
AAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034903XLOC_034903Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055469TCONS_00055469Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR022879V-ATPase_su_B/beta
IPR005723ATPase_V1-cplx_bsu
IPR004100ATPase_F1/V1/A1_a/bsu_N
IPR024034ATPase_F1/V1_b/a_C
IPR020003ATPase_a/bsu_AS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016820hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
Vocabulary: Biological Process
TermDefinition
GO:0015991ATP hydrolysis coupled proton transport
GO:0015992proton transport
GO:0046034ATP metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0033180proton-transporting V-type ATPase, V1 domain
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0046034 ATP metabolic process
biological_process GO:0015992 proton transport
cellular_component GO:0033180 proton-transporting V-type ATPase, V1 domain
molecular_function GO:0005524 ATP binding
molecular_function GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 56..388
e-value: 2.0E-93
score: 312.2
NoneNo IPR availableCDDcd01135V_A-ATPase_Bcoord: 107..390
e-value: 0.0
score: 599.265
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 162..388
e-value: 4.7E-69
score: 232.2
IPR022879V-type ATP synthase regulatory subunit B/betaPIRSFPIRSF039114V-ATPsynth_beta/V-ATPase_Bcoord: 26..502
e-value: 3.3E-243
score: 805.2
IPR022879V-type ATP synthase regulatory subunit B/betaHAMAPMF_00310ATP_synth_B_archcoord: 33..497
score: 54.676
IPR005723ATPase, V1 complex, subunit BTIGRFAMTIGR01040TIGR01040coord: 35..496
e-value: 3.4E-296
score: 980.0
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainPFAMPF02874ATP-synt_ab_Ncoord: 39..105
e-value: 4.2E-12
score: 46.3
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalGENE3D1.10.1140.10coord: 398..496
e-value: 1.6E-17
score: 62.9
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active sitePROSITEPS00152ATPASE_ALPHA_BETAcoord: 379..388
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 110..394

Blast
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BLAST of TCONS_00055469-protein vs. Swiss-Prot (Human)
Match: VATB2 (V-type proton ATPase subunit B, brain isoform OS=Homo sapiens GN=ATP6V1B2 PE=1 SV=3)

HSP 1 Score: 895.575 bits (2313), Expect = 0.000e+0
Identity = 428/484 (88.43%), Postives = 454/484 (93.80%), Query Frame = 0 
Query:   16 ASKQHTHAVVRDYISQPRLNYKTVSGVNGPLVILDQVKFPKFAEIVSLTLPDGTQRSGQVLEVSGSKAVVQVFEGTSGIDAKHTACEFTGDILRTPISSDMLGRVFNGSGKPIDNGPPILAEDYLDINGQPINPWSRIYPEEMIQTGISAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVKHGKGTMDYSDDNFAIVFAAMGVNRETARFFEQDFKENGSMENVCLFLNLANDPTIERIITPRLALTAAEYLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSDDLLYLEFLQKFEKNFIAQGNYENRTIFESLDIGWKLLRIFPKEMLKRIPAKTLAEFYQRDGGK 499
             +++   AV R+Y+SQPRL YKTVSGVNGPLVILD VKFP++AEIV LTLPDGT+RSGQVLEVSGSKAVVQVFEGTSGIDAK T+CEFTGDILRTP+S DMLGRVFNGSGKPID GP +LAED+LDI GQPINP  RIYPEEMIQTGISAID MNSIARGQKIPIFSA+GLPHNEIAAQICRQAGLVK  K  +DYS++NFAIVFAAMGVN ETARFF+ DF+ENGSM+NVCLFLNLANDPTIERIITPRLALT AE+LAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYA YAIGKDVQAMKAVVGEEAL+SDDLLYLEFLQKFE+NFIAQG YENRT+FE+LDIGW+LLRIFPKEMLKRIP  TL+EFY RD  K
Sbjct:   27 GAREQALAVSRNYLSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAK 510
The following BLAST results are available for this feature:
BLAST of TCONS_00055469-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VATB20.000e+088.43V-type proton ATPase subunit B, brain isoform OS=H... [more]
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