TCONS_00055477-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055477-protein
Unique NameTCONS_00055477-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length697

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055477-protein ID=TCONS_00055477-protein|Name=TCONS_00055477-protein|organism=Clytia hemisphaerica|type=polypeptide|length=697bp
MRLKFLRNVLIVVLFTLAVSHLIHASPPLDASTVSKAKGASKVAGSLSDV
SSKASKFTKVLNGGLSTFSTYVYGITATMAVIDLIWPGIIPTSEPAYVAE
MRAYFEVLKAEFRVVKNQINDLKLYVQERSTDQIYAGYIISIHTTELSYQ
DYMDASASLRDAYGKSFVQNYDQLGNHADKLYTGLVIADDNLNIAKNAIS
YTKGDRDRILEIMFELFNVINMGIKHEALYYKLTDDTEQIAVLDDRWGSR
MNNLQKVMKAIDDEVVKGANDRMQTDFNENVVELKDKDNKKMAQNLYDFF
SEKYYWRDWVVLVYSKSVSGFSNHAYNYCRNNCIFRKRLGGGVDKTIYVF
HVNKASGSWMTKSKASKILSTGPYTYRGKCYKYEWFFFSRYRKSYSCDKP
QKDLAKTRDAVRGELKVCSITKAIVMLKKKHSYGIVGDDRIKVHLKKGDF
NAFAVGPYGSSSAQESVEGYSINGGWTSWTPYTSCSKTCGGGIKTISRYC
RNPVPQDGGKSCSGRSTYSRSCNTFSCFSKTFLKKKIESIMISKKKLSNT
DFAVYLRAQLKTTYPEYRFAVNAYKSIRGSSKHSMQGYSYVYIFRKHGRN
VVVSYTKKSNKVPNSSTLRAIEKRIVAAIKNKGKDAKKSRQLAWAALKKE
GYRVAMVLVVRFGNGLRTRSTGGGVTFENFNSSGSHKSSLVIMLGKA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034906XLOC_034906Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055477TCONS_00055477Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 476..528
e-value: 3.7E-8
score: 43.1
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 478..527
e-value: 3.3E-8
score: 33.5
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 472..527
e-value: 4.6E-15
score: 55.2
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 473..528
score: 11.682
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 472..527

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055477-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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