TCONS_00055487-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055487-protein
Unique NameTCONS_00055487-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055487-protein ID=TCONS_00055487-protein|Name=TCONS_00055487-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
MGKQNSKLKPEIINDLIEQTEFTEHELQDWYKGFLKDCPDGTLTVEEFKK
IYGNFFPYGDAAKFAEHVFRTFDANGDGRIDFREFICALSVTSRGTLEQK
LKWAFSMYDLDGNGDISREEMLEIVRAIYKMVGNVVKMPEDESTPEKRVE
KIFRQMDKNTDGKLSLPEFIEGAKSDPSIVRLLQCNPDTGASR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034910XLOC_034910Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055487TCONS_00055487Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 22..41
score: 72.12
coord: 114..132
score: 70.45
coord: 8..22
score: 48.21
coord: 164..184
score: 66.67
coord: 92..111
score: 76.92
coord: 138..153
score: 73.56
coord: 68..89
score: 73.78
NoneNo IPR availableGENE3D1.10.238.10coord: 100..186
e-value: 1.5E-23
score: 82.0
NoneNo IPR availableGENE3D1.10.238.110coord: 1..99
e-value: 8.7E-39
score: 132.0
IPR002048EF-hand domainSMARTSM00054efh_1coord: 64..92
e-value: 0.001
score: 28.4
coord: 100..128
e-value: 1.7E-6
score: 37.6
coord: 148..176
e-value: 0.0026
score: 27.0
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 98..171
e-value: 1.8E-16
score: 60.3
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 39..86
e-value: 9.0E-8
score: 31.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 96..131
score: 13.704
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 40..58
score: 6.061
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 60..95
score: 13.314
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 144..179
score: 12.393
IPR002048EF-hand domainCDDcd00051EFhcoord: 100..174
e-value: 2.86776E-15
score: 66.0321
IPR002048EF-hand domainCDDcd00051EFhcoord: 65..126
e-value: 2.4614E-17
score: 71.8101
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 157..169
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 109..121
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 73..85
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..185

Blast
[Close]
BLAST of TCONS_00055487-protein vs. Swiss-Prot (Human)
Match: NCALD (Neurocalcin-delta OS=Homo sapiens GN=NCALD PE=1 SV=2)

HSP 1 Score: 335.88 bits (860), Expect = 2.476e-119
Identity = 156/191 (81.68%), Postives = 173/191 (90.58%), Query Frame = 0 
Query:    1 MGKQNSKLKPEIINDLIEQTEFTEHELQDWYKGFLKDCPDGTLTVEEFKKIYGNFFPYGDAAKFAEHVFRTFDANGDGRIDFREFICALSVTSRGTLEQKLKWAFSMYDLDGNGDISREEMLEIVRAIYKMVGNVVKMPEDESTPEKRVEKIFRQMDKNTDGKLSLPEFIEGAKSDPSIVRLLQCNPDTGA 191
            MGKQNSKL+PE++ DL+E T+FTEHE+Q+WYKGFL+DCP G L++EEFKKIYGNFFPYGDA+KFAEHVFRTFDANGDG IDFREFI ALSVTSRG LEQKLKWAFSMYDLDGNG IS+ EMLEIV+AIYKMV +V+KMPEDESTPEKR EKIFRQMD N DGKLSL EFI GAKSDPSIVRLLQC+P +  
Sbjct:    1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLLQCDPSSAG 191
The following BLAST results are available for this feature:
BLAST of TCONS_00055487-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCALD2.476e-11981.68Neurocalcin-delta OS=Homo sapiens GN=NCALD PE=1 SV... [more]
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