TCONS_00055493-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055493-protein
Unique NameTCONS_00055493-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1246

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055493-protein ID=TCONS_00055493-protein|Name=TCONS_00055493-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1246bp
MVHTRHSFLKDTEEHPLENGKLSGQDEEEEEEVADEEEQRRENDIDLDAT
GLGTENNKHQTGDIKDEGEEVMEEDGQEKQEEEQESPVKKSKRKRRNSSE
LLHSYDTLTDTLQRRSMRTRSRDKSRYMDRYEKTRFRQRSSKIRRSGRQR
KKVFETFNESEIQREIERKRQQLIEDAASMYDSIKRRRIHSETQDEEDDS
DEEGESGDSDEEEEEEEEEHPAYNLRKEKQQTKRYQPPLPTSRSRRREVM
FEMHSPMRQPHKMKRIPQHASSPHHKRRRRTSSTSSSSDDEAAFERRKAK
SMNQARSRCLPMNFQSNDMVGVLKNRERARELGAGSSLADVEPMNIDSNT
SFEDVGGLDHHIRSLKEMVVFPLLYPEIFQKFSISPPRGVLFYGPPGTGK
TLVARALANECTKKGQKVAFFMRKGADCLSKWVGESERQLRLLFDQAYTM
RPSIIFFDEIDGIAPVRSTRQDQIHSSIVSTLLALMDGLDARGEIVVIGA
TNRLDSIDPALRRPGRFDREFLFGLPNRKARQKIIEINTSSWQPKLSKEF
TLQLADKCVGYCGADIKALCTEAALFALRRRYPQIYKTSKKLALNTNEIK
ISSVDFKNALKSITPASNRSNISPGVSLPEHLKPLLSAYVEKATDIVMKI
FPAGKKITEYDPEEEFDLSDSESQSIYEKPKSRHRDTSSNDQQEFFKDQQ
DLVEQNLTHRPRILLAGTNGNGQTAYIAPSLLYAMEHLSTHMIDLPALFG
TSTRTPEEAVAQLFREARRTAPSILYLPHLESWWSSINDTTRASFMTLLY
DLPSHVPVLLVSTCDSPYETLSEELQDLFSTSHNEVLMVSSPTDEQRNEF
FQDIIMKQALKKPVEQNKRVKRTLEELPEVETVKERELSQEEVNKLMEVE
ENILRELRLYLRGVTWKLLADRKYKEFSKPVDPDEVDDYFQVITTPMDLS
TVMTRINAHHYNSCTHYLQDIDLITNNCLEYNPDRDQFDKQLRNRACELR
DVAYQLVHNDLDPDFEKQCVEIYERRKNAKPGHYGQFAPSFLKVLPKNST
PAASKTQTTNEISNEAAKPIALMPDPSGSRFSRRVRGMNDGVLYDPSVLE
LVDCRRKSAVKASRTSESENKSPNKTEGELTTEAEDSQEESQEDKENRME
DHNKEVQVMETNDENVDGEDSVNRVKRSLEFDKGGKSENEEATSLLQELV
SNTSSCNVKDLERMYSSLCRCLNEHKNETERHLVIKELRCVLENLA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034913XLOC_034913Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055493TCONS_00055493Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..85
NoneNo IPR availableCOILSCoilCoilcoord: 1135..1162
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
NoneNo IPR availableGENE3D1.10.8.60coord: 532..622
e-value: 1.4E-17
score: 63.1
NoneNo IPR availableGENE3D3.40.50.300coord: 653..863
e-value: 4.4E-5
score: 22.3
NoneNo IPR availableGENE3D3.40.50.300coord: 339..531
e-value: 4.6E-53
score: 179.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1109..1171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 662..692
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1048..1083
NoneNo IPR availableCDDcd00009AAAcoord: 386..525
e-value: 4.97431E-27
score: 108.387
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 970..989
score: 32.39
coord: 936..952
score: 45.27
coord: 922..935
score: 29.19
coord: 952..970
score: 18.99
IPR001487BromodomainSMARTSM00297bromo_6coord: 900..1012
e-value: 1.0E-13
score: 61.6
IPR001487BromodomainGENE3D1.20.920.10coord: 896..1165
e-value: 7.9E-28
score: 96.4
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 917..987
e-value: 4.5E-16
score: 58.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 927..989
score: 15.59
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 900..1008
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 386..527
e-value: 5.5E-20
score: 82.4
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 390..524
e-value: 4.0E-41
score: 140.4
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 495..513
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 349..619
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 895..948
coord: 696..858

Blast
BLAST of TCONS_00055493-protein vs. Swiss-Prot (Human)
Match: ATAD2 (ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1)

HSP 1 Score: 902.123 bits (2330), Expect = 0.000e+0
Identity = 535/1294 (41.34%), Postives = 766/1294 (59.20%), Query Frame = 0
Query:   77 QEKQEEEQESPVKKSKRKRRNSSELLHSYDTLTDTLQRRSMRTRSR----DKSRYMDRY---EKTRFRQRSSKIRRSGRQRKKVFE---TFNESEIQREIERKRQQLIEDAASMYDSIKRRRIHSETQDEEDDSDEEGESGDSDEEEEEEEEEHPA-----------------------------------YNLRKEKQQTKRYQPPLPTSRSRRREVMFEM--HSPMRQPHKMKRIPQHASSPHHKR--RRRTS------STSSSSDDEAAFERRKAKSMNQARSRCLPMNFQSNDMVGVLKNRERARELGAGSSLADVEPMNIDSNTSFEDVGGLDHHIRSLKEMVVFPLLYPEIFQKFSISPPRGVLFYGPPGTGKTLVARALANECTKKGQKVAFFMRKGADCLSKWVGESERQLRLLFDQAYTMRPSIIFFDEIDGIAPVRSTRQDQIHSSIVSTLLALMDGLDARGEIVVIGATNRLDSIDPALRRPGRFDREFLFGLPNRKARQKIIEINTSSWQPKLSKEFTLQLADKCVGYCGADIKALCTEAALFALRRRYPQIYKTSKKLALNTNEIKISSVDFKNALKSITPASNRSNISPGVSLPEHLKPLLSAYVEKATDIVMKIFPAGK----KITEYD---PEEEFDL--SDSESQSIYEKPKSRHRDTSSNDQQEFFKDQQDLVEQNLTHRPRILLAGTNGNGQTAYIAPSLLYAMEHLSTHMIDLPALFGTSTRTPEEAVAQLFREARRTAPSILYLPHLESWWSSINDTTRASFMTLLYDLPSHVPVLLVSTCDSPYETLSEELQDLFSTSHNEVLMVSSPTDEQRNEFFQDIIMKQALKKPVEQNKRVKRTLEELPEVETVKERELSQEEVNKLMEVEENILRELRLYLRGVTWKLLADRKYKEFSKPVDPDEVDDYFQVITTPMDLSTVMTRINAHHYNSCTHYLQDIDLITNNCLEYNPDRDQFDKQLRNRACELRDVAYQLVHNDLDPDFEKQCVEIYERRKNAKPGHYGQFAPSFLKVLPKNSTPAASKTQTTNEISNEAAKPIALMPDPSGSRFSRRVRGMNDGVLYDPSVLELVDCRRKSAVKA------SRTSESENKSPNKTE----GELTTEAEDSQEESQEDK------------ENRMEDHNKEV------------------QVMETNDENVDGEDSVNRVKRS----------LEFDKGGK----------SENEEATSLLQELVSNTSSCNVKDLERMYSSLCRCLNEHKNETERHLVIKELRCVLENLA 1246
            +E+  E++  PV +S R R       H ++   D   RRS R RSR    ++S   D+          Q+   +++  RQR +  E    FNE+E             E   +MY   K++ I  +  DEE   ++EG    S+E E++E E+                                      Y LR+ K  T  YQ PL   R +R+  +F     SP R  +++        SP+ KR  RRR +      ++SSSS+DE  FERR+ +S N+A +RCLP+NF+ +++ G+ K+R     +  G+SLADV+PM +DS+  F+ VGGL +HI +LKEMVVFPLLYPE+F+KF I PPRG LFYGPPGTGKTLVARALANEC++  ++VAFFMRKGADCLSKWVGESERQLRLLFDQAY MRPSIIFFDEIDG+APVRS+RQDQIHSSIVSTLLALMDGLD+RGEIVVIGATNRLDSIDPALRRPGRFDREFLF LP+++AR++I++I+T  W PK    F  +LA+ CVGYCGADIK++C EAAL ALRRRYPQIY TS+KL L+ + I IS+ DF+ A++ + PAS R+  SPG +L   +KPLL   V+K  + + ++FP  +    K  + D   P  E DL  SD +  S+YE   S+     + D   F    ++   Q ++ RPRIL+ G  G GQ +++AP++++A+E  + + +D+P LFG ST +PEE  AQ+ REA+RTAPSI+Y+PH+  WW  +  T +A+F TLL ++PS  PVLL++T D P+  L EE+Q+LF   + E+  V  P  E+R +FF+D+I+KQA K P+ + K V + LE LP     + R L+ EEV +L E EE+  RELR++LR VT +L  D++++ F+KPVDPDEV DY  VI  PMDLS+V+++I+ H Y +   YL+DIDLI +N LEYNPDRD  D+ +R+RAC LRD AY ++  +LD DFE+ C EI E RK  +     ++APS+  V+PK ++      ++  E + +   P   +   + ++  R++R  ++  L        +   +  +  A      S T E+++ S +  E    GE + E  + Q+ + E K            EN +ED  K                    Q++  +DEN   E  V R+ R+          +  +K              ++E   +LL+ +V  + + N+  LE +Y+ + +C+  H+ + ++  +I+++   +EN +
Sbjct:  118 KEEHREDKVIPVTRSLRARNIVQSTEHLHEDNGDVEVRRSCRIRSRYSGVNQSMLFDKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGVFNETE-------------ESNLNMYTRGKQKDI--QRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEENQKRYYLRQRKA-TVYYQAPLEKPRHQRKPNIFYSGPASPARPRYRLSS--AGPRSPYCKRMNRRRHAIHSSDSTSSSSSEDEQHFERRRKRSRNRAINRCLPLNFRKDELKGIYKDR-----MKIGASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQRAVTSPGQALSTVVKPLLQNTVDKILEALQRVFPHAEFRTNKTLDSDISCPLLESDLAYSDDDVPSVYENGLSQKSSHKAKDNFNFLHLNRNACYQPMSFRPRILIVGEPGFGQGSHLAPAVIHALEKFTVYTLDIPVLFGVSTTSPEETCAQVIREAKRTAPSIVYVPHIHVWWEIVGPTLKATFTTLLQNIPSFAPVLLLATSDKPHSALPEEVQELFIRDYGEIFNVQLPDKEERTKFFEDLILKQAAKPPISKKKAVLQALEVLPVAPPPEPRSLTAEEVKRLEEQEEDTFRELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYNPDRDPGDRLIRHRACALRDTAYAIIKEELDEDFEQLCEEIQESRKK-RGCSSSKYAPSYYHVMPKQNSTLVGDKRSDPEQNEKLKTPSTPVACSTPAQLKRKIRKKSNWYLGTIKKRRKISQAKDDSQNAIDHKIESDTEETQDTSVDHNETGNTGESSVEENEKQQNASESKLELRNNSNTCNIENELEDSRKTTACTELRDKIACNGDASSSQIIHISDENEGKEMCVLRMTRARRSQVEQQQLITVEKALAILSQPTPSLVVDHERLKNLLKTVVKKSQNYNIFQLENLYAVISQCIYRHRKDHDKTSLIQKMEQEVENFS 1387          
The following BLAST results are available for this feature:
BLAST of TCONS_00055493-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATAD20.000e+041.34ATPase family AAA domain-containing protein 2 OS=H... [more]
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