TCONS_00055515-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055515-protein
Unique NameTCONS_00055515-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length485

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055515-protein ID=TCONS_00055515-protein|Name=TCONS_00055515-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
MASPRTRRVLRELKFKDGNNTCFECSSHNPQWVSVSYGIWICLDCSGKHR
GLGVHLSFVRSVTMDKWKDNELEKMKAGGNNKAKDFFTSQSEYNQGWSIQ
EKYNSRTAALYRDKITTESEGRPWSESTSSAKNYTPPTRSSGGLQTSPRA
NKNMSSMSSNSSSNGQAINNMDDLESFLGKSKGEISKDKEDFFIKRQMEN
DSRPENLPPSQGGKYVGFGSSPAPSQNNSSSGWDSTLSSLQAGWNTFSIG
AQQVASAASEKAVKVGSKLNENVIKPASNKAQEFGTNVSAKANEGKLVSE
VSASLQGAATKASSYGMKGWYSLQSYMGYETNPQQSAITANNQDNSYQNG
GSSQSGSGYGGLTGQDGVNPFQAAMSNQNSSSNDLVDFNDSASSKSNSGG
WGSTGDWEKATPANDGWDDNWGDSPAKKKNEPAVVKSQTTTATKKTTPKK
QDSWGNDADEWENWLNDDSTSYKSTPSPRAGKKGD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034924XLOC_034924Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055515TCONS_00055515Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP
Vocabulary: Molecular Function
TermDefinition
GO:0005096GTPase activator activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005096 GTPase activator activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 59..80
score: 45.92
coord: 38..55
score: 58.43
coord: 19..38
score: 45.34
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 7..124
e-value: 1.9E-47
score: 173.6
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 8..118
e-value: 1.3E-33
score: 115.4
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 7..124
score: 27.035
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..485
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..169
NoneNo IPR availableSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 6..111

Blast
[Close]
BLAST of TCONS_00055515-protein vs. Swiss-Prot (Human)
Match: ARFG1 (ADP-ribosylation factor GTPase-activating protein 1 OS=Homo sapiens GN=ARFGAP1 PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 3.445e-92
Identity = 158/364 (43.41%), Postives = 212/364 (58.24%), Query Frame = 0 
Query:    1 MASPRTRRVLRELKFKDGNNTCFECSSHNPQWVSVSYGIWICLDCSGKHRGLGVHLSFVRSVTMDKWKDNELEKMKAGGNNKAKDFFTSQSEYNQGWSIQEKYNSRTAALYRDKITTESEGRPWSESTSSAKNYTPPTRSSGGLQTSPRANKNMSSMSSNSSSNGQAINNMDD--LESFLGKSKGEISKDKEDFFIKRQMENDSRPENLPPSQGGKYVGFGSSPAPSQNNSSSGWDSTLSSLQAGWNTFSIGAQQVASAASEKAVKVGSK-----------LNENVIKPASNKAQEFGTNVSAKANEGKLVSEVSASLQGAATKASSYGMKGWYSLQSYMGYETNPQQSAITANNQDNSYQNGG 351
            MASPRTR+VL+E++ +D NN CFEC + NPQWVSV+YGIWICL+CSG+HRGLGVHLSFVRSVTMDKWKD ELEKMKAGGN K ++F  SQ +Y+  WS+QEKYNSR AAL+RDK+   +EGR WS  +S A+N+TPP          PR    + SM    S   Q++    D   E +L    G                          +QG +YVGFG++P P Q       ++ +SSL +GW++F+ GA + ASAA E A K GS+           LNENV+KPA  K +           EGK+  +VS+ +   A+K    G KGW  + ++    +   +  + + ++ +SYQN G
Sbjct:    1 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAEGREWSLESSPAQNWTPP---------QPR---TLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLGSYQG----------------------AQGNRYVGFGNTPPP-QKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGATKFGSQASQKASELGHSLNENVLKPAQEKVK-----------EGKIFDDVSSGVSQLASKVQGVGSKGWRDVTTFF---SGKAEGPLDSPSEGHSYQNSG 315
The following BLAST results are available for this feature:
BLAST of TCONS_00055515-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARFG13.445e-9243.41ADP-ribosylation factor GTPase-activating protein ... [more]
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