TCONS_00055550-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055550-protein
Unique NameTCONS_00055550-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length360

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055550-protein ID=TCONS_00055550-protein|Name=TCONS_00055550-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
MPRSFLIKKPPKIHYKGYTDITEDEETAYYSPLSPTYPKQASSSSSTLES
NLQALQKANELLKNSLTSLPRKDFIFQKVLAESQCNTMQILTSLECNDEP
IIPSPTDTYSSNSSAVSSEPDIQLRGNNQSLTDKEKEISYWLHTSRKEHY
SQTDQKKITKSRSSSTSDPTKVFPCHICGKVFNAHYNLTRHLPVHTGARP
FKCKICGKGFRQASTLCRHKIIHTQERPHKCQECGKSFNRSSTLNTHMRI
HLGYKPFICTICNKGFHQKGNYKNHLLTHSQVKPYKCTICSKSFHQVYNL
TFHMYTHNDKKPYYCQYCQKGFCRNFDLKKHIRKIHSKDLPVMKAPVIIG
DQPRIMEIRT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034937XLOC_034937Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055550TCONS_00055550Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65
NoneNo IPR availableGENE3D3.30.160.60coord: 299..341
e-value: 1.2E-15
score: 57.1
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 257..279
e-value: 8.6E-4
score: 19.9
NoneNo IPR availableGENE3D2.20.25.10coord: 222..234
e-value: 6.7E-9
score: 35.1
NoneNo IPR availableGENE3D3.30.160.60coord: 235..248
e-value: 6.9E-15
score: 54.3
coord: 208..221
e-value: 3.5E-12
score: 45.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 201..223
e-value: 9.4E-5
score: 22.6
coord: 173..192
e-value: 4.0E-5
score: 23.7
coord: 229..251
e-value: 9.8E-7
score: 28.8
coord: 313..336
e-value: 7.8E-5
score: 22.8
NoneNo IPR availableGENE3D2.40.155.10coord: 182..207
e-value: 1.6E-16
score: 60.5
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 285..309
e-value: 3.4E-5
score: 23.6
NoneNo IPR availableGENE3D3.30.160.60coord: 284..298
e-value: 1.7E-9
score: 37.1
NoneNo IPR availableGENE3D3.30.160.60coord: 142..181
e-value: 2.2E-5
score: 23.9
NoneNo IPR availableGENE3D2.40.155.10coord: 249..283
e-value: 1.9E-24
score: 86.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..129
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 313..336
e-value: 0.014
score: 24.6
coord: 201..223
e-value: 0.0021
score: 27.3
coord: 173..195
e-value: 0.017
score: 24.3
coord: 285..307
e-value: 0.0045
score: 26.2
coord: 257..279
e-value: 0.0016
score: 27.7
coord: 229..251
e-value: 7.8E-5
score: 32.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 203..223
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 287..307
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 175..195
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 259..279
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 315..336
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 231..251
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 173..200
score: 14.69
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 229..256
score: 16.373
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 201..228
score: 15.396
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 313..341
score: 12.84
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 285..312
score: 13.671
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 257..284
score: 12.175
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 171..223
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 266..322
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 210..266

Blast
[Close]
BLAST of TCONS_00055550-protein vs. Swiss-Prot (Human)
Match: FEZF1 (Fez family zinc finger protein 1 OS=Homo sapiens GN=FEZF1 PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.106e-104
Identity = 163/314 (51.91%), Postives = 205/314 (65.29%), Query Frame = 0 
Query:   54 ALQKANELLKNSLTSLPRKDFIFQKVLAESQCNTMQILTSLECNDEPIIPS------PTDTYSSNSSAVSSEPDIQLRGNNQSLTDKEKEISYW-----LHTSRKEHYSQTDQKKITK---------SRSSSTSDPTKVFPCHICGKVFNAHYNLTRHLPVHTGARPFKCKICGKGFRQASTLCRHKIIHTQERPHKCQECGKSFNRSSTLNTHMRIHLGYKPFICTICNKGFHQKGNYKNHLLTHSQVKPYKCTICSKSFHQVYNLTFHMYTHNDKKPYYCQYCQKGFCRNFDLKKHIRKIHSKDLPVMKAPV 347
            AL    +L +++L  L +   +  +V+  S  + M  L  L   D P  P+      P  +Y   SS +  +P   L   N+ +    ++         L  ++ +HY +   + +++         SR S  + P KVF C +CGKVFNAHYNLTRH+PVHTGARPF CK+CGKGFRQASTLCRHKIIHTQE+PHKC +CGK+FNRSSTLNTH RIH GYKPF+C  C KGFHQKGNYKNH LTHS  K +KC IC+K+FHQVYNLTFHM+THNDKKP+ C  C KGFCRNFDLKKH+RK+H   L + + P 
Sbjct:  124 ALSLKGDLARDAL-PLQQYKLVRPRVVNHSSFHAMGALCYLNRGDGPCHPAAGVNIHPVASYFL-SSPLHPQPKTYLAERNKLVVPAVEKYPSGVAFKDLSQAQLQHYMKESAQLLSEKIAFKTSDFSRGSPNAKP-KVFTCEVCGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHTRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQFKCNICNKAFHQVYNLTFHMHTHNDKKPFTCPTCGKGFCRNFDLKKHVRKLHDSSLGLARTPA 434
The following BLAST results are available for this feature:
BLAST of TCONS_00055550-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FEZF11.106e-10451.91Fez family zinc finger protein 1 OS=Homo sapiens G... [more]
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