TCONS_00055557-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055557-protein
Unique NameTCONS_00055557-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length283

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055557-protein ID=TCONS_00055557-protein|Name=TCONS_00055557-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
WQPGHFKKGRIWPKFGTLVPWVNIWGCFFHFLKXHKADYMRDEIERGHGY
VECVVNYIEYLVGLEQSTSKMSSSEGLQEIFQITSDSLKLVEYLVSTYGR
KIDPLINTYDKRFLFLCLRLQSILNLKLYKMKKEQTKKNSKILSEYYRQY
KPMNAIGRSPYSKPNQRGSTGTPSPSSPISDPSPGGSVASTGSAGSNSSS
NGVTIPCDMHEKSYQYLSNTKYLVNGHRLWDDSESLTNQVQGFIQSLSKK
AGILTMQSTTLHIVDFTRQGLLIIQESRKAAVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034942XLOC_034942Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055557TCONS_00055557Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007797TF_AF4/FMR2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
20406080100120140160180200220240260280Expect = 1.5E-42 / Score = 145.9SequencePF05110
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007797Transcription factor AF4/FMR2PFAMPF05110AF-4coord: 35..271
e-value: 1.5E-42
score: 145.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055557-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
WQPGHFKKGRIWPKFGTLVPWVNIWGCFFHFLKXHKADYMRDEIERGHGYVECVVNYIEYLVGLEQSTSKMSSSEGLQEIFQITSDSLKLVEYLVSTYGRKIDPLINTYDKRFLFLCLRLQSILNLKLYKMKKEQTKKNSKILSEYYRQYKPMNAIGRSPYSKPNQRGSTGTPSPSSPISDPSPGGSVASTGSAGSNSSSNGVTIPCDMHEKSYQYLSNTKYLVNGHRLWDDSESLTNQVQGFIQSLSKKAGILTMQSTTLHIVDFTRQGLLIIQESRKAAVS20406080100120140160180200220240260280Expect = 5.38e-22 / Id = 29.57SequenceAFF4
Match NameE-valueIdentityDescription
AFF45.379e-2229.57AF4/FMR2 family member 4 OS=Homo sapiens GN=AFF4 P... [more]
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