TCONS_00055724-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055724-protein
Unique NameTCONS_00055724-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length371

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055724-protein ID=TCONS_00055724-protein|Name=TCONS_00055724-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
TGNDDLENLIASRKEGKSSHGSTVLENVQLEAFSKIEATIRYTNCDILLS
TEAGRCDNCQVNRKSLQTMERRKSLEDDRPKAKKPHSSMTKEQLKSRLKT
VAKENKELKRKQKRLEKKIEKLVRAKGVKIKDKGTQQVVDDVLKGECPFD
EKSPMFLLWEQQKKAAKLKKLTSMRWHPVIIRWCLSINLRSPGTYEQLRA
TGFLQLPHRSTLQQYTSFTSIGTSFNPDVIEKYCNELKISTLPTHERVCS
IMFDEMKIKSGLVFSRSTGTIIGFTELGRVSDEIDSLERSLEKDRKKIRP
LATHVLAIMVRGFFNHFNFPIGFYATRSASAEQLFAIIWEAVGVMEMVGF
NVYAFVCDGASATANSLRCIN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035074XLOC_035074Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055724TCONS_00055724Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021896Transposase_37
Vocabulary: Molecular Function
TermDefinition
GO:0004803transposase activity
Vocabulary: Biological Process
TermDefinition
GO:0006313transposition, DNA-mediated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006313 transposition, DNA-mediated
molecular_function GO:0004803 transposase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..125
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availableGENE3D1.20.1170.10coord: 4..305
e-value: 0.0012
score: 17.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..95
IPR021896Transposase proteinPFAMPF12017Tnp_P_elementcoord: 168..358
e-value: 3.2E-10
score: 39.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055724-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top